RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ZNF141Q15928 474 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.1□□□□□ -1.59
RFFL-202ENST00000394597 CST9LP1Q5W188 147 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 RPUSD3Q6P087 351 aaKnown RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 MOB3CQ70IA8 216 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 SIRT6Q8N6T7 355 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 PHYHIPQ92561 330 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 ZNF501Q96CX3 271 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 NOL4LQ96MY1 436 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 VSTM2LQ96N03 204 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 TWSG1Q9GZX9 223 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 SPTBP11277 2137 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 ANKRD20A5PA0PJZ0 165 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 C4orf51C9J302 202 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 PPP5D1E7EU14 171 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 UBE2CO00762 179 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 OR2J2O76002 312 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 CALCBP10092 127 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 CD46P15529 392 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 HOXA6P31267 233 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 POU3F4P49335 361 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 PSG6Q00889 435 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 GUCA2AQ02747 115 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 RELQ04864 619 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 SRYQ05066 204 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 MIDNQ504T8 468 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 OR7E24Q6IFN5 339 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 KIRREL2Q6UWL6 708 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 THNSL2Q86YJ6 484 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 GPR137CQ8N3F9 429 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 LFNGQ8NES3 379 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 OR4C5Q8NGB2 326 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 OR5H2Q8NGV7 314 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 MITD1Q8WV92 249 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 RAB24Q969Q5 203 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 ARSGQ96EG1 525 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 SAT2Q96F10 170 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 NMNAT3Q96T66 252 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 CABLES2Q9BTV7 478 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 DOK5Q9P104 306 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 LPAR3Q9UBY5 353 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 KCNG2Q9UJ96 466 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 ZDBF2Q9HCK1 2354 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 CKAP5Q14008 2032 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 ABCA7Q8IZY2 2146 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 TRAV1-2A0A0B4J238 106 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 NPIPB9F8W1W9 429 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 G3V3Y1 287 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 MFNGO00587 321 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 AQP7O14520 342 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 TAAR5O14804 337 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 GSTZ1O43708 216 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 PTBP3O95758 552 aaKnown RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 SEMG1P04279 462 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 OR2T7P0C7T2 308 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 SP9P0CG40 484 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 OR8G3PP0DMU2 310 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 SLC35A1P78382 337 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 POU3F1Q03052 451 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 DHRS2Q13268 280 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 HABP2Q14520 560 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 MICBQ29980 383 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 CHRFAM7AQ494W8 412 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 Q499Y3 187 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 DHRS13Q6UX07 377 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 COMMD1Q8N668 190 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 OR2T27Q8NH04 317 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 OIT3Q8WWZ8 545 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 ST8SIA1Q92185 356 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 CHRNA10Q9GZZ6 450 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 RBM7Q9Y580 266 aaKnown RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 SLCO1B1Q9Y6L6 691 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 NCOR1O75376 2440 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 C5orf52A6NGY3 159 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 M0QZK8 103 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 GGCTO75223 188 aaKnown RBP5.09□□□□□ -1.59
RFFL-202ENST00000394597 IFNA1P01562 189 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 VAMP3Q15836 100 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 HAGHQ16775 308 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 IAH1Q2TAA2 248 aaPredicted RBP5.09□□□□□ -1.59
RFFL-202ENST00000394597 GXYLT1Q4G148 440 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 ETV3LQ6ZN32 361 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 DBX2Q6ZNG2 339 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 MDGA2Q7Z553 956 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 GPR119Q8TDV5 335 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 VOPP1Q96AW1 172 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 MIB2Q96AX9 1013 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 SNX22Q96L94 193 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 ALG12Q9BV10 488 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 DDA1Q9BW61 102 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 RBM24Q9BX46 236 aaKnown RBP5.09□□□□□ -1.59
RFFL-202ENST00000394597 CHRNA9Q9UGM1 479 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 ACAD8Q9UKU7 415 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 PCDHGA1Q9Y5H4 931 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 TCF20Q9UGU0 1960 aaKnown RBP5.09□□□□□ -1.59
RFFL-202ENST00000394597 A0A087WUJ7 227 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 A0A0B4J2E0 115 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 A0A1B0GX12 115 aa5.09□□□□□ -1.59
RFFL-202ENST00000394597 FITM1A5D6W6 292 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms