RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PCDHB10Q9UN67 800 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 SLC22A13Q9Y226 551 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMEM14AQ9Y6G1 99 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 SONP18583 2426 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 TANC2Q9HCD6 1990 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 PPIAL4EA0A075B759 164 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 LOC105371242A0A075B767 164 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 LOC100130705A0A1B0GUX0 176 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 LRRC30A6NM36 301 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 F5H0A9 414 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 PPIAL4DF5H284 164 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 LOC110117498-PIK3R3F6TDL0 507 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 DLGAP1O14490 977 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 LCE2BO14633 110 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF254O75437 659 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 RGS9O75916 674 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 TTRP02766 147 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 TFF1P04155 84 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 KRT8P05787 483 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM157CP0CG43 387 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 PPIAL4FP0DN26 164 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 IRF2P14316 349 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 RPS2P15880 293 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAHP16930 419 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 SRD5A1P18405 259 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 GABRB1P18505 474 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 ADRA2CP18825 462 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 CFL1P23528 166 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 GNALP38405 381 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 MDH2P40926 338 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF91Q05481 1191 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 EGR3Q06889 387 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 SMN1Q16637 294 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF829Q3KNS6 432 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMEM155Q4W5P6 130 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 CEP78Q5JTW2 689 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 BCL2L15Q5TBC7 163 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 LIPNQ5VXI9 398 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 DEGS2Q6QHC5 323 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 C1orf229Q6ZS94 237 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 KCTD8Q6ZWB6 473 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 C11orf53Q8IXP5 236 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 KLHL36Q8N4N3 616 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 SPICQ8N5J4 248 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 CELF2-AS1Q8N7Q2 184 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 YIPF7Q8N8F6 280 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR1M1Q8NGA1 313 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 Q8TCH9 128 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 APH1BQ8WW43 257 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 RORBQ92753 470 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 RPL3LQ92901 407 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 RFKQ969G6 155 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 ITPKCQ96DU7 683 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 SLC22A4Q9H015 551 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 RGCCQ9H4X1 137 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 PATZ1Q9HBE1 687 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 MMP26Q9NRE1 261 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 ACOXLQ9NUZ1 547 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM118AQ9NWS6 357 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMEM160Q9NX00 188 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 RNF7Q9UBF6 113 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 NUFIP1Q9UHK0 495 aaKnown RBP6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 GNG8Q9UK08 70 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR52A1Q9UKL2 312 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 PPIAL4AQ9Y536 164 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 R4GMQ9 66 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 ABCA1O95477 2261 aa6.42□□□□□ -1.38
HMGB3P1-201ENST00000393368 TRAV20A0A0B4J274 112 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 A0A0U1RQV5 110 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 A0A1B0GTI1 187 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 A0A1B0GW55 424 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 METTL15A6NJ78 407 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 TRAPPC2LH3BP13 241 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 J3QRE1 110 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 CDIPTO14735 213 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 PHYHO14832 338 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 PTBP3O95758 552 aaKnown RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 IGLV3-1P01715 115 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 GYPAP02724 150 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR2T7P0C7T2 308 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DUX4L2P0CJ85 424 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DUX4L3P0CJ86 424 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DUX4L4P0CJ87 422 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DUX4L5P0CJ88 424 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DUX4L6P0CJ89 424 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DUX4L7P0CJ90 424 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 HNF1AP20823 631 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DCTDP32321 178 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 SRP14P37108 136 aaKnown RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DDOSTP39656 456 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 MTNR1AP48039 350 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 SNRPGP62308 76 aaKnown RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF154Q13106 437 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 OCLNQ16625 522 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF181Q2M3W8 571 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF404Q494X3 552 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 WDR38Q5JTN6 314 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF684Q5T5D7 378 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms