RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 RPA2P15927 270 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 B3GALT5-AS1P59052 145 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 RPS27AP62979 156 aaKnown RBP12.59□□□□□ -0.39
CLCN4-201ENST00000380829 UBA52P62987 128 aaKnown RBP12.59□□□□□ -0.39
CLCN4-201ENST00000380829 HIST3H3Q16695 136 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 PHYHD1Q5SRE7 291 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 DHRS7BQ6IAN0 325 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-201ENST00000380829 SPINK14Q6IE38 97 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 DMBX1Q8NFW5 382 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 OR2AJ1Q8NGZ0 328 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 THRSPQ92748 146 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 ZNF775Q96BV0 537 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-201ENST00000380829 HAVCR1Q96D42 359 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 TMEM231Q9H6L2 316 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 PLEKHA1Q9HB21 404 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 FAM206AQ9NX38 181 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 TRAV14DV4A0A0A6YYC5 116 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 ANKRD20A5PA0PJZ0 165 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 PINLYPA6NC86 204 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 NPIPA2E9PIF3 369 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 NPIPA3F8WFD2 350 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 RER1O15258 196 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
CLCN4-201ENST00000380829 CSRP1P21291 193 aaKnown RBP12.58□□□□□ -0.4
CLCN4-201ENST00000380829 SRD5A2P31213 254 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 PTH2RP49190 550 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 PPIAP62937 165 aaKnown RBP12.58□□□□□ -0.4
CLCN4-201ENST00000380829 CSNK2A1P68400 391 aaPredicted RBP12.58□□□□□ -0.4
CLCN4-201ENST00000380829 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 PDZK1IP1Q13113 114 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 SPAG16Q8N0X2 631 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 TNFAIP8L1Q8WVP5 186 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 FCAMRQ8WWV6 532 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 CDC6Q99741 560 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 MRI1Q9BV20 369 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 TLNRD1Q9H1K6 362 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 CKLFQ9UBR5 152 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 ETV7Q9Y603 341 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 NAP1L6A6NFF2 107 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 TLX3O43711 291 aaPredicted RBP12.58□□□□□ -0.4
CLCN4-201ENST00000380829 TMEM127O75204 238 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 TNFSF15O95150 251 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 SELLP14151 372 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 MMP16P51512 607 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 EFNB2P52799 333 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 AP3S2P59780 193 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 GMFBP60983 142 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 SPOCK1Q08629 439 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 WIPI1Q5MNZ9 446 aaPredicted RBP12.58□□□□□ -0.4
CLCN4-201ENST00000380829 OLFML2AQ68BL7 652 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 OR9K2Q8NGE7 335 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 RAB40AQ8WXH6 277 aa12.58□□□□□ -0.4
CLCN4-201ENST00000380829 TTRP02766 147 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 IL5P05113 134 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 ISG15P05161 165 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 SLC2A1P11166 492 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 MGMTP16455 207 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 CSNK1A1P48729 337 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 POU3F4P49335 361 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 PRKXP51817 358 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 GABREP78334 506 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 EIF3IQ13347 325 aaKnown RBP12.57□□□□□ -0.4
CLCN4-201ENST00000380829 HABP2Q14520 560 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-201ENST00000380829 NAA11Q9BSU3 229 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-201ENST00000380829 GPR87Q9BY21 358 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 PBOV1Q9GZY1 135 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 ZFP57Q9NU63 452 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 LRFN1Q9P244 771 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 CGGBP1Q9UFW8 167 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-201ENST00000380829 IL17BQ9UHF5 180 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 DCDC2BA2VCK2 349 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 TERTO14746 1132 aaKnown RBP12.57□□□□□ -0.4
CLCN4-201ENST00000380829 ACTL6AO96019 429 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 IGFBP3P17936 291 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-201ENST00000380829 GDF1P27539 372 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 HSD11B1P28845 292 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 ATXN7L3Q14CW9 347 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-201ENST00000380829 RAB11BQ15907 218 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 SGCAQ16586 387 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 LRRC37A5PQ49AS3 106 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 TMEM244Q5VVB8 128 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 SLC36A1Q7Z2H8 476 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 ZNF546Q86UE3 836 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 ZNF471Q9BX82 626 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-201ENST00000380829 FAM117AQ9C073 453 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 PIGMQ9H3S5 423 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 GHRLQ9UBU3 117 aa12.57□□□□□ -0.4
CLCN4-201ENST00000380829 C21orf140B9A014 251 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 ZNF878C9JN71 531 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 SLC17A2O00624 439 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
CLCN4-201ENST00000380829 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 S100A6P06703 90 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 ANOS1P23352 680 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 CD96P40200 585 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 TAS2R20P59543 309 aa12.56□□□□□ -0.4
CLCN4-201ENST00000380829 TAF13Q15543 124 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms