RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 AGBL4Q5VU57 503 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 Q6ZVH6 145 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 HMGN2P46Q86SG4 172 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 OR51F2Q8NH61 342 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM18Q96B42 140 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 PELI1Q96FA3 418 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TECTBQ96PL2 329 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 HIST1H2AAQ96QV6 131 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 WWTR1Q9GZV5 400 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 PDE7BQ9NP56 450 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 A4GALTQ9NPC4 353 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 CLEC5AQ9NY25 188 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 NTNG1Q9Y2I2 539 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 PLXND1Q9Y4D7 1925 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 ARID1AO14497 2285 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 A0A1W2PR48 441 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 F6UZH7 168 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 HSD17B6O14756 317 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 BNIP3LO60238 219 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 GIMD1P0DJR0 217 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 LAMP2P13473 410 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 HSD11B1P28845 292 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 OR10J1P30954 320 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 GPR4P46093 362 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 PDLIM4P50479 330 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 EFNB2P52799 333 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TBPL1P62380 186 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 NTHL1P78549 312 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 PRPF38BQ5VTL8 546 aaKnown RBP6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM205Q6UW68 189 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 OR2T33Q8NG76 320 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 ADAMTS18Q8TE60 1221 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 KCNE4Q8WWG9 221 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 OR5P2Q8WZ92 322 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 RSPRY1Q96DX4 576 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM56Q96MV1 263 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 GPR35Q9HC97 309 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM56-RWDD3S4R434 201 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 COL4A2P08572 1712 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TRAV18A0A075B6X5 111 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 ANKUB1A6NFN9 424 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TLCD2A6NGC4 264 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF860A6NHJ4 632 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 CTAG2O75638 210 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 CTSBP07858 339 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 OR5G3P0C626 314 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 IL9P15248 144 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 ADRA2CP18825 462 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 PRSS3P35030 304 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 FRKP42685 505 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-201ENST00000379989 OR3A2P47893 321 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 SLC16A1P53985 500 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM33P57088 247 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 PRPS1P60891 318 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 SPOCK1Q08629 439 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TDRG1Q3Y452 100 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 AMZ1Q400G9 498 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 LDLRAD2Q5SZI1 272 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 FAM71E1Q6IPT2 247 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 RPUSD3Q6P087 351 aaKnown RBP6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TMEM64Q6YI46 380 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 OLIG3Q7RTU3 272 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 GJD3Q8N144 294 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 OR5AK2Q8NH90 309 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 GPX8Q8TED1 209 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TBX15Q96SF7 602 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 PBDC1Q9BVG4 233 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 TBL1XR1Q9BZK7 514 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 CNTD2Q9H8S5 307 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 HSF4Q9ULV5 492 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 HS3ST3A1Q9Y663 406 aa6.66□□□□□ -1.34
CDKL5-201ENST00000379989 MRPS18BQ9Y676 258 aaKnown RBP6.66□□□□□ -1.34
CDKL5-201ENST00000379989 LRRK1Q38SD2 2015 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 IGHV2-70DA0A0C4DH43 119 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 TRBV2A0A0J9YWF9 115 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 FAM221AA4D161 298 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 NPIPA2E9PIF3 369 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 NRG2O14511 850 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-201ENST00000379989 TAAR5O14804 337 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 SRPX2O60687 465 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-201ENST00000379989 TNFSF13O75888 250 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 DUS4LO95620 317 aaKnown RBP6.65□□□□□ -1.34
CDKL5-201ENST00000379989 IGLV3-19P01714 112 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 CSRP1P21291 193 aaKnown RBP6.65□□□□□ -1.34
CDKL5-201ENST00000379989 FPR2P25090 351 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 CX3CR1P49238 355 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 MMP16P51512 607 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 ANKRD16Q6P6B7 361 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 MBOAT2Q6ZWT7 520 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 OR4C5Q8NGB2 326 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 ABHD3Q8WU67 409 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 MRGPRFQ96AM1 343 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 LRRC3BQ96PB8 259 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 SLC6A7Q99884 636 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 ABHD14AQ9BUJ0 271 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 SH2B3Q9UQQ2 575 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 ZNF281Q9Y2X9 895 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 TMED7Q9Y3B3 224 aa6.65□□□□□ -1.34
CDKL5-201ENST00000379989 TCF20Q9UGU0 1960 aaKnown RBP6.65□□□□□ -1.34
CDKL5-201ENST00000379989 TRAV39A0A0B4J263 110 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms