RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 OR4A4PQ8NGN8 299 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CYB5D2Q8WUJ1 264 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SLC25A28Q96A46 364 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 IKZF5Q9H5V7 419 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 RBFOX2O43251 390 aaKnown RBP eCLIP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 HERPUD1Q15011 391 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF79Q15937 498 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 DHRS7BQ6IAN0 325 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM91Q6ZNR0 172 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 STARD10Q9Y365 291 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 KRASP01116 189 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 HLA-DOBP13765 273 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 PTGDSP41222 190 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CASP9P55211 416 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF766Q5HY98 468 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF66Q6ZN08 573 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ADAMTS17Q8TE56 1095 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SLAMF6Q96DU3 332 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 A0A1W2PPC1 479 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 FCGR2CP31995 323 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SOX2P48431 317 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 PIGFQ07326 219 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 C11orf40Q8WZ69 217 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 GDF2Q9UK05 429 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 BCAT2O15382 392 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 NMBP08949 121 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SIM1P81133 766 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 BSXQ3C1V8 233 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM179BQ7Z7N9 219 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 LILRB2Q8N423 598 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 PARD6GQ9BYG4 376 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 EGLN1Q9GZT9 426 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SLC26A1Q9H2B4 701 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 RABAC1Q9UI14 185 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SORBS2O94875 1100 aaKnown RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 RPS26P62854 115 aaKnown RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 FOXD4Q12950 439 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SMIM12Q96EX1 92 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 FRRS1LQ9P0K9 344 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CYB5R3P00387 301 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CORO6Q6QEF8 472 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SFT2D1Q8WV19 159 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CACNA1SQ13698 1873 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 GLRA1P23415 457 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 AKR1C2P52895 323 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SKP2Q13309 424 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 LYRM7Q5U5X0 104 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CRIPAKQ8N1N5 446 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OR4D9Q8NGE8 314 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 DNAJB12Q9NXW2 375 aaKnown RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 EEF1E1-BLOC1S5C9J1V9 151 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SGIP1Q9BQI5 828 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 GIMAP2Q9UG22 337 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CDC42EP3Q9UKI2 254 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ADAMTSL3P82987 1691 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 HYAL3O43820 417 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 MPIG6BO95866 241 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF586Q9NXT0 402 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 MAS1P04201 325 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OR4A8P0C604 315 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 DANCRP0C864 163 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ATF1P18846 271 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 S100A10P60903 97 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SLC22A6Q4U2R8 563 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 MRPL21Q7Z2W9 205 aaKnown RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OR11G2Q8NGC1 345 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 AQP3Q92482 292 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 EFEMP2O95967 443 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 PTDSS2Q9BVG9 487 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CDC20BQ86Y33 519 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 FAM169BQ8N8A8 192 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 GALMQ96C23 342 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 HCFC2Q9Y5Z7 792 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 IQCF6A8MYZ5 107 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 PDCD6O75340 191 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 UCP2P55851 309 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 DLK2Q6UY11 383 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 BEND2Q8NDZ0 799 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 KLF13Q9Y2Y9 288 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ERHP84090 104 aaKnown RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 C2orf27AQ580R0 203 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SLC26A10Q8NG04 563 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 OR4C16Q8NGL9 310 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 WDR89Q96FK6 387 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 GPR132Q9UNW8 380 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 RBFOX3A6NFN3 312 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 EFSO43281 561 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF136P52737 540 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 HLA-DRB3P79483 266 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 FOXK1P85037 733 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 RAB35Q15286 201 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ADAM5Q6NVV9 412 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SEMA5BQ9P283 1151 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 C22orf46C9J442 243 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PMCHL2Q9BQD1 86 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SMOC1Q9H4F8 434 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 NIT2Q9NQR4 276 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 TCRBV16S1A1N1A0A5B0 115 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 C1QTNF9BB2RNN3 333 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 VIPR2P41587 438 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms