RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SRD5A2P31213 254 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ARL4DP49703 201 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 MTPNP58546 118 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 CXADRP78310 365 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 GAGE2BQ13066 116 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 SMCO1Q147U7 214 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 HSPB2Q16082 182 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 GAGE2EQ4V326 116 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 GAGE2AQ6NT46 116 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ANKRD16Q6P6B7 361 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 AHSA2Q719I0 299 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 TMEM144Q7Z5S9 345 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 OOSP2Q86WS3 158 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 LRRC25Q8N386 305 aaPredicted RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 Q8N402 240 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ZNF676Q8N7Q3 588 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 OR9A2Q8NGT5 310 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 OR52I2Q8NH67 350 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 XAGE5Q8WWM1 108 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 PPCDCQ96CD2 204 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 MSI2Q96DH6 328 aaKnown RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 OR5M11Q96RB7 305 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 RNF2Q99496 336 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 FAIM2Q9BWQ8 316 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 PROK2Q9HC23 129 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ABCB10Q9NRK6 738 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 GAGE2DQ9UEU5 116 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ASF1AQ9Y294 204 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 B3GNT3Q9Y2A9 372 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 TRBV4-1A0A0J9YWV2 114 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ANKRD65E5RJM6 399 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 SLC28A2O43868 658 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 UGT2B17O75795 530 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 CCNKO75909 580 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 SERPINA1P01009 418 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 NR2F6P10588 404 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 GTF2E2P29084 291 aaKnown RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 PPICP45877 212 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 UQCRFS1P47985 274 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 BLOC1S1P78537 153 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 MRPS22P82650 360 aaKnown RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 PRR5P85299 388 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 CDK6Q00534 326 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 KRR1Q13601 381 aaKnown RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 CTF1Q16619 201 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 DGUOKQ16854 277 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 FAHD2BQ6P2I3 314 aaPredicted RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 IZUMO2Q6UXV1 221 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ZNF841Q6ZN19 808 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 Q6ZS46 218 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 MBOAT2Q6ZWT7 520 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ZNF627Q7L945 461 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 SLC29A4Q7RTT9 530 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 PRSS35Q8N3Z0 413 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ARIH2OSQ8N7S6 290 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 RELL2Q8NC24 303 aaPredicted RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 OR1L6Q8NGR2 347 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 OR10A6Q8NH74 314 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 FAR1Q8WVX9 515 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 DGCR14Q96DF8 476 aaKnown RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 FAHD2AQ96GK7 314 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 HSPA12BQ96MM6 686 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 TSSK2Q96PF2 358 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 IGHV5-51A0A0C4DH38 117 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 FTCDNL1E5RQL4 147 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 AP4M1O00189 453 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 TCAPO15273 167 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 TGOLN2O43493 480 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 FGF17O60258 216 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 MPZL2O60487 215 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 DBHP09172 617 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 NKX2-1P43699 371 aaPredicted RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 LGALS7P47929 136 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 MAZP56270 477 aaKnown RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 HIST1H3AP68431 136 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 FAM3AP98173 230 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 PAX2Q02962 417 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 BAMBIQ13145 260 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 MEF2DQ14814 521 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 TRIM16LQ309B1 348 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ZBED5Q49AG3 693 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 HIST2H3PS2Q5TEC6 136 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 CASP12Q6UXS9 341 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ZNF836Q6ZNA1 936 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 HIST2H3AQ71DI3 136 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 DPPA2Q7Z7J5 298 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 B3GNT8Q7Z7M8 397 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ATG4DQ86TL0 474 aaPredicted RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 WDFY1Q8IWB7 410 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 NRMQ8IXM6 262 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ZNF611Q8N823 705 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 APCDD1LQ8NCL9 501 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 OR10X1Q8NGY0 326 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 OR2AJ1Q8NGZ0 328 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ATOH1Q92858 354 aaPredicted RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 FLYWCH2Q96CP2 140 aaKnown RBP3.37□□□□□ -1.87
MCF2-203ENST00000370576 NXPE2Q96DL1 559 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 IMPAD1Q9NX62 359 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 OAZ3Q9UMX2 235 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 ZNF443Q9Y2A4 671 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms