RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SMIM19Q96E16 107 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 PERPQ96FX8 193 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 PGLYRP3Q96LB9 341 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 SAMD8Q96LT4 415 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 SLITRK2Q9H156 845 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 ALX4Q9H161 411 aaPredicted RBP13.03□□□□□ -0.32
LMO4-201ENST00000370542 OR52D1Q9H346 318 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 MTHFD2LQ9H903 347 aaPredicted RBP13.03□□□□□ -0.32
LMO4-201ENST00000370542 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 UPB1Q9UBR1 384 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 ZNF69Q9UC07 566 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 COPS3Q9UNS2 423 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 CHST2Q9Y4C5 530 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 SIRT4Q9Y6E7 314 aaPredicted RBP13.03□□□□□ -0.32
LMO4-201ENST00000370542 IGKV3D-15A0A087WSY6 115 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 A0A1W2PNR3 127 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 CPSF4LA6NMK7 179 aaKnown RBP13.02□□□□□ -0.33
LMO4-201ENST00000370542 INAFM1C9JVW0 142 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 DNASE2O00115 360 aaPredicted RBP13.02□□□□□ -0.33
LMO4-201ENST00000370542 HAX1O00165 279 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 SMAD9O15198 467 aaKnown RBP13.02□□□□□ -0.33
LMO4-201ENST00000370542 CH25HO95992 272 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 OR2T7P0C7T2 308 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 ATF1P18846 271 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 VEGFCP49767 419 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 OR10A3P58181 314 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 PLAURQ03405 335 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 FUT5Q11128 374 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 RBMS2Q15434 407 aaKnown RBP13.02□□□□□ -0.33
LMO4-201ENST00000370542 ETFDHQ16134 617 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 LRFN4Q6PJG9 635 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 TMPPEQ6ZT21 453 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 Q6ZTK2 550 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 WFDC8Q8IUA0 241 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 NRMQ8IXM6 262 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 BEST4Q8NFU0 473 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 OR2T27Q8NH04 317 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 CCDC107Q8WV48 283 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 TMEM171Q8WVE6 324 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 TEAD3Q99594 435 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 WFDC6Q9BQY6 131 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 SLC38A1Q9H2H9 487 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 SCPEP1Q9HB40 452 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 RCE1Q9Y256 329 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 CUBNO60494 3623 aa13.02□□□□□ -0.33
LMO4-201ENST00000370542 RAB19A4D1S5 217 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 J3QLW9 94 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 BHLHE40O14503 412 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 APOC1P02654 83 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 IFNA4P05014 189 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 CSF1P09603 554 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 SNRPBP14678 240 aaKnown RBP13.01□□□□□ -0.33
LMO4-201ENST00000370542 ZNF19P17023 458 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 PGCP20142 388 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 COX5AP20674 150 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 GDI2P50395 445 aaKnown RBP13.01□□□□□ -0.33
LMO4-201ENST00000370542 INSL4Q14641 139 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 CDK5R1Q15078 307 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 GPR68Q15743 365 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 ABLIM2Q6H8Q1 611 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 LPCAT3Q6P1A2 487 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 B3GLCTQ6Y288 498 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 FRRS1Q6ZNA5 592 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 TMPRSS11FQ6ZWK6 438 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 SSX8Q7RTT4 187 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 COMTD1Q86VU5 262 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 CMTM4Q8IZR5 234 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 ZNF614Q8N883 585 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 BBS1Q8NFJ9 593 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 OR1S1Q8NH92 325 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 SLC25A43Q8WUT9 341 aaPredicted RBP13.01□□□□□ -0.33
LMO4-201ENST00000370542 TMEM234Q8WY98 164 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 GHSRQ92847 366 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 MARC2Q969Z3 335 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 C4orf36Q96KX1 117 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 CXorf58Q96LI9 332 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 SLC19A3Q9BZV2 496 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 ARL6Q9H0F7 186 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 NGBQ9NPG2 151 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 EXOSC3Q9NQT5 275 aaKnown RBP13.01□□□□□ -0.33
LMO4-201ENST00000370542 BIN3Q9NQY0 253 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 NKIRAS2Q9NYR9 191 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 RNF115Q9Y4L5 304 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 PLCE1Q9P212 2302 aa13.01□□□□□ -0.33
LMO4-201ENST00000370542 IGHV3-15A0A0B4J1V0 119 aa13□□□□□ -0.33
LMO4-201ENST00000370542 ZNF98A6NK75 572 aa13□□□□□ -0.33
LMO4-201ENST00000370542 ANXA2P2A6NMY6 339 aa13□□□□□ -0.33
LMO4-201ENST00000370542 CSTAP01040 98 aa13□□□□□ -0.33
LMO4-201ENST00000370542 MELTFP08582 738 aa13□□□□□ -0.33
LMO4-201ENST00000370542 EDNRAP25101 427 aa13□□□□□ -0.33
LMO4-201ENST00000370542 FKBP2P26885 142 aaKnown RBP13□□□□□ -0.33
LMO4-201ENST00000370542 APOBEC1P41238 236 aaKnown RBP13□□□□□ -0.33
LMO4-201ENST00000370542 RAD52P43351 418 aa13□□□□□ -0.33
LMO4-201ENST00000370542 DIO1P49895 249 aa13□□□□□ -0.33
LMO4-201ENST00000370542 RASGEF1BQ0VAM2 473 aa13□□□□□ -0.33
LMO4-201ENST00000370542 GGTLC2Q14390 218 aa13□□□□□ -0.33
LMO4-201ENST00000370542 SFRP4Q6FHJ7 346 aaPredicted RBP13□□□□□ -0.33
LMO4-201ENST00000370542 DNM1P46Q6ZS02 220 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms