RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 BTNL8Q6UX41 500 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 PRR18Q8N4B5 295 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 C2CD4AQ8NCU7 369 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ZNRF4Q8WWF5 429 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 IL22RA2Q969J5 263 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 RPEQ96AT9 228 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 TNFRSF19Q9NS68 423 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 CLDN16Q9Y5I7 305 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 NCBP2LA6PVI3 153 aaKnown RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 TCRBP04435 133 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 MPGP29372 298 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 SDHAP31040 664 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 DSCR9P59020 149 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ZBTB37Q5TC79 503 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR51L1Q8NGJ5 315 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 GPR150Q8NGU9 434 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 SIGLEC10Q96LC7 697 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 LHX9Q9NQ69 397 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 CBLN4Q9NTU7 201 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 EHFQ9NZC4 300 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 WASHC3Q9Y3C0 194 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 KAT6AQ92794 2004 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 IGHV1OR15-9A0A0B4J2B8 117 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 A6NIN4 97 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 NME4O00746 187 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ISLRO14498 428 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR7C1O76099 320 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR4A8P0C604 315 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 RAB5AP20339 215 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 RFC3P40938 356 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 SH3BP2P78314 561 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 SRPXP78539 464 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 POU3F1Q03052 451 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 HIST3H3Q16695 136 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 Q1RN00 199 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ABHD17CQ6PCB6 329 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 NHLRC2Q8NBF2 726 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 CDS1Q92903 461 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 INPP5EQ9NRR6 644 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 UBL3O95164 117 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 CPMP14384 443 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 CLDN15P56746 228 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 CLDN8P56748 225 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 SEC61A1P61619 476 aaKnown RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 CCDC144NLQ6NUI1 221 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 GUSBP11Q6P575 273 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ACOT4Q8N9L9 421 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 DMBX1Q8NFW5 382 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR13C5Q8NGS8 318 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR5R1Q8NH85 324 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR2V1Q8NHB1 315 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ABHD4Q8TB40 342 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ABHD3Q8WU67 409 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 INSM2Q96T92 566 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 NEU1Q99519 415 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 GALNT9Q9HCQ5 603 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 IGSF5Q9NSI5 407 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 UMAD1C9J7I0 102 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 E9PQ18 207 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ACTL6AO96019 429 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF883P0CG24 379 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 T-ENOLP0DO92 83 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 GCAP28676 217 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 GDNFP39905 211 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 SOX4Q06945 474 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 TMEM268Q5VZI3 342 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 NIT1Q86X76 327 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 CLDN22Q8N7P3 220 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 DEFB108BQ8NET1 73 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR4S1Q8NGB4 309 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR5K2Q8NHB8 316 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 NRG4Q8WWG1 115 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 RSG1Q9BU20 258 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 MEGF9Q9H1U4 602 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 QSER1Q2KHR3 1735 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ANTXRLA6NF34 631 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 HPNP05981 417 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 LIPFP07098 398 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 OR8G3PP0DMU2 310 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ITGAMP11215 1152 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 LTBQ06643 244 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 MEP1BQ16820 701 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ACOT6Q3I5F7 207 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 GTDC1Q4AE62 458 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 TECRLQ5HYJ1 363 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 UBE2NLQ5JXB2 153 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 PTP4A1Q93096 173 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 CMBLQ96DG6 245 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 SEC16AO15027 2179 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 TMEM200CA6NKL6 621 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 G3V3Q6 166 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 TK1P04183 234 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 SLC35E2P0CK97 266 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 HOXD9P28356 352 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 PRLHRP49683 370 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 PPOXP50336 477 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 SUCLG1P53597 346 aaKnown RBP7.81□□□□□ -1.16
SYNE1-206ENST00000367253 PAGE3Q5JUK9 113 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 ACER2Q5QJU3 275 aa7.81□□□□□ -1.16
SYNE1-206ENST00000367253 PIP5KL1Q5T9C9 394 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms