RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 TMED9Q9BVK6 235 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 CACNG6Q9BXT2 260 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 RBM38Q9H0Z9 239 aaKnown RBP12.67□□□□□ -0.38
CCNE1-202ENST00000357943 DYNLRB1Q9NP97 96 aa12.67□□□□□ -0.38
CCNE1-202ENST00000357943 MRPL15Q9P015 296 aaKnown RBP12.67□□□□□ -0.38
CCNE1-202ENST00000357943 H0YL77 283 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 MLNRO43193 412 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 LIPAP38571 399 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 SOX2P48431 317 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 ZNF81P51508 661 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 GP2P55259 537 aaKnown RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 INSL4Q14641 139 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 YIF1BQ5BJH7 314 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 DMRTC1Q5HYR2 192 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 SYT6Q5T7P8 510 aaPredicted RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 PAMR1Q6UXH9 720 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 CSNK2A3Q8NEV1 391 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 OR10AD1Q8NGE0 317 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 OR13F1Q8NGS4 319 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 OR13C3Q8NGS6 347 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 GPR148Q8TDV2 347 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 TSEN15Q8WW01 171 aaKnown RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 TMEM203Q969S6 136 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 ADAT3Q96EY9 351 aaPredicted RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 PAPOLGQ9BWT3 736 aaKnown RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 TPK1Q9H3S4 243 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 PLEKHA1Q9HB21 404 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 ZNF275Q9NSD4 429 aaPredicted RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 TMEM100Q9NV29 134 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 CGGBP1Q9UFW8 167 aaPredicted RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 GPR160Q9UJ42 338 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 PLEKHA6Q9Y2H5 1048 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 CEPT1Q9Y6K0 416 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 CACNA1DQ01668 2161 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 POLQO75417 2590 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 DSCAMO60469 2012 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 ZNF816-ZNF321PA0A0X1KG74 233 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 DHRS7CA6NNS2 312 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 C17orf100A8MU93 164 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 SPRY3O43610 288 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 OCM2P0CE71 109 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 ZNF12P17014 697 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 CD53P19397 219 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 RPS25P62851 125 aaKnown RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 FTMTQ8N4E7 242 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 CCDC54Q8NEL0 328 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 OR13G1Q8NGZ3 307 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 PIGCQ92535 297 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 FGGYQ96C11 551 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 VRK1Q99986 396 aaPredicted RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 MS4A5Q9H3V2 200 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 CYSLTR2Q9NS75 346 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 ENPP5Q9UJA9 477 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 DHDHQ9UQ10 334 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 SF3B6Q9Y3B4 125 aaKnown RBP12.66□□□□□ -0.38
CCNE1-202ENST00000357943 PMF1-BGLAPU3KQ54 211 aa12.66□□□□□ -0.38
CCNE1-202ENST00000357943 FLNBO75369 2602 aaKnown RBP12.65□□□□□ -0.38
CCNE1-202ENST00000357943 AKAP9Q99996 3911 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 ITPR2Q14571 2701 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 ARFGEF3Q5TH69 2177 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 ZNF850A8MQ14 1090 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 OVOL3O00110 214 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 CCRL2O00421 344 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 CST4P01036 141 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 IGHV1-46P01743 117 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 BMP4P12644 408 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 PPOXP50336 477 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 KRT74Q7RTS7 529 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 OR2Z1Q8NG97 314 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 TMEM106AQ96A25 262 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 DGCR14Q96DF8 476 aaKnown RBP12.65□□□□□ -0.38
CCNE1-202ENST00000357943 OR14A2Q96R54 314 aa12.65□□□□□ -0.38
CCNE1-202ENST00000357943 ADAT1Q9BUB4 502 aaKnown RBP12.65□□□□□ -0.38
CCNE1-202ENST00000357943 A0A1B0GWJ7 208 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 RAF1P04049 648 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 PRDX4Q13162 271 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 Q499Y3 187 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 ZMAT1Q5H9K5 638 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 CEP78Q5JTW2 689 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 ZBTB37Q5TC79 503 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 TMEM42Q69YG0 159 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 MS4A15Q8N5U1 240 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 UBASH3BQ8TF42 649 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 ITFG2Q969R8 447 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 C10orf35Q96D05 121 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 ORAI1Q96D31 301 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 ELMOD3Q96FG2 381 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 LURAP1Q96LR2 239 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 GPR173Q9NS66 373 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 NDUFB11Q9NX14 153 aa12.64□□□□□ -0.39
CCNE1-202ENST00000357943 A0A1W2PPK0 400 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 ANKRD61A6NGH8 418 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF879B4DU55 563 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 F5H5P2 479 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 H7C417 338 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 GMDSO60547 372 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 NDUFS7O75251 213 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 SC5DO75845 299 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms