RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SLC35D2Q76EJ3 337 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 OR51A2Q8NGJ7 313 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 OR1L3Q8NH93 324 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF563Q8TA94 476 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF501Q96CX3 271 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-202ENST00000347617 KTI12Q96EK9 354 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-202ENST00000347617 GAL3ST1Q99999 423 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 OR10A5Q9H207 317 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 FN3KRPQ9HA64 309 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 G6PC2Q9NQR9 355 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 LANCL2Q9NS86 450 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 MRPL22Q9NWU5 206 aaKnown RBP14.08□□□□□ -0.16
HMGA1-202ENST00000347617 TREM2Q9NZC2 230 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 U3KQA8 63 aa14.08□□□□□ -0.16
HMGA1-202ENST00000347617 TECTAO75443 2155 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 CPAMD8Q8IZJ3 1885 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 WIPF3A6NGB9 483 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 TGFBR3LH3BV60 316 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 IL33O95760 270 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 TSPAN15O95858 294 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 OR8U8P0C7N1 319 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 SPTBP11277 2137 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 FOLR1P15328 257 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 NME2P22392 152 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 PI4KAP42356 2102 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 SUCLG1P53597 346 aaKnown RBP14.07□□□□□ -0.16
HMGA1-202ENST00000347617 CD81P60033 236 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 ACY1Q03154 408 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 GLO1Q04760 184 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 AWAT1Q58HT5 328 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 OR52W1Q6IF63 320 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 Q6ZRG5 221 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 SLC29A4Q7RTT9 530 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 GVQW1Q8N7I0 195 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 AKR1E2Q96JD6 320 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 S100A13Q99584 98 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 BCL2L14Q9BZR8 327 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 METTL8Q9H825 291 aaKnown RBP14.07□□□□□ -0.16
HMGA1-202ENST00000347617 SRPK3Q9UPE1 567 aa14.07□□□□□ -0.16
HMGA1-202ENST00000347617 TMEM184BQ9Y519 407 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-202ENST00000347617 TMEM14DPA8MWL7 114 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 SLC16A7O60669 478 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 CLN5O75503 358 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 CBR1P16152 277 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 CXCR1P25024 350 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 ACKR3P25106 362 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 DUSP3P51452 185 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-202ENST00000347617 CCR4P51679 360 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 RPL7L1Q6DKI1 246 aaKnown RBP14.06□□□□□ -0.16
HMGA1-202ENST00000347617 TTLL10Q6ZVT0 673 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 SHISA5Q8N114 240 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 TMEM105Q8N8V8 129 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 OR9K2Q8NGE7 335 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 C16orf52Q8NHV5 167 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 NKD1Q969G9 470 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 TMEM230Q96A57 120 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 MESP1Q9BRJ9 268 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 NAA11Q9BSU3 229 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-202ENST00000347617 CNTD2Q9H8S5 307 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 PLEKHA2Q9HB19 425 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 FGF21Q9NSA1 209 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 STRAPQ9Y3F4 350 aaKnown RBP14.06□□□□□ -0.16
HMGA1-202ENST00000347617 A0A1B0GW64 132 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 A0A1B0GX78 115 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 A6NIZ1 184 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 PMP2P02689 132 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 HTR5AP47898 357 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 RAP1BP61224 184 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 RAP1AP62834 184 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 UNC119Q13432 240 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 RAB32Q13637 225 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF574Q6ZN55 896 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-202ENST00000347617 UBAC2Q8NBM4 344 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 LFNGQ8NES3 379 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 EDARADDQ8WWZ3 215 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 RAB3CQ96E17 227 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 NUDT22Q9BRQ3 303 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 PBDC1Q9BVG4 233 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 CNTNAP3Q9BZ76 1288 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 ARV1Q9H2C2 271 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 C5orf66Q9H5L9 145 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 EMC9Q9Y3B6 208 aa14.06□□□□□ -0.16
HMGA1-202ENST00000347617 IGKV3D-11A0A0A0MRZ8 115 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 TXNL1O43396 289 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 GPANK1O95872 356 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 ONECUT2O95948 504 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 SERPINA5P05154 406 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 CFIP05156 583 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 SEC11BP0C7V7 166 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 VSIG8P0DPA2 414 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 SLC2A1P11166 492 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF823P16415 610 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 SNCAP37840 140 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 MMP16P51512 607 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 TAS2R46P59540 309 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 ACKR1Q16570 336 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 PCK2Q16822 640 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 GUSBP11Q6P575 273 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF615Q8N8J6 731 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 OR5H2Q8NGV7 314 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms