RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 DHPSP49366 369 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 DAP3P51398 398 aaKnown RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 RRADP55042 308 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CLRN1P58418 232 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 SLC9A3R2Q15599 337 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 HSPB2Q16082 182 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 C11orf87Q6NUJ2 197 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 BEST3Q8N1M1 668 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF248Q8NDW4 579 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 VRK1Q99986 396 aaPredicted RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 TAS2R8Q9NYW2 309 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 CKLFQ9UBR5 152 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 B3GALT5Q9Y2C3 310 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 NOP16Q9Y3C1 178 aaKnown RBP5.3□□□□□ -1.56
CLCN3-201ENST00000347613 DCHS2Q6V1P9 2916 aa5.3□□□□□ -1.56
CLCN3-201ENST00000347613 IGLV3-32A0A0A0MS00 114 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 A0A0J9YW62 118 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 PINLYPA6NC86 204 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 TSPAN4O14817 238 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 HTR3BO95264 441 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 IGLV3-1P01715 115 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 UBCP0CG48 685 aaKnown RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 CD34P28906 385 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 HAAOP46952 286 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ID4P47928 161 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 SUCLG1P53597 346 aaKnown RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 SRSF4Q08170 494 aaKnown RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 SGCAQ16586 387 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM244Q5VVB8 128 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF704Q6ZNC4 412 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 PGAP1Q75T13 922 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 RABEPKQ7Z6M1 372 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 LYG2Q86SG7 212 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 HOGA1Q86XE5 327 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF584Q8IVC4 421 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 UEVLDQ8IX04 471 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 PRR7Q8TB68 274 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 MITD1Q8WV92 249 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM234Q8WY98 164 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 PIGTQ969N2 578 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 SPACA9Q96E40 222 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 BSCL2Q96G97 398 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 HS3ST6Q96QI5 342 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ST6GALNAC5Q9BVH7 336 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 WNT5BQ9H1J7 359 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 MBD2Q9UBB5 411 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 WNT16Q9UBV4 365 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 RAB22AQ9UL26 194 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 IGHV1-45A0A0A0MS14 117 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 C13orf42A0A1B0GVH6 325 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 DHRS7CA6NNS2 312 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 B8ZZF3 427 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 TNFSF11O14788 317 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ANGPTL7O43827 346 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM127O75204 238 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 COX6A1P12074 109 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ICAM2P13598 275 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 PGAM2P15259 253 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 NAGAP17050 411 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ZP3P21754 424 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 SERPINF1P36955 418 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 STARP49675 285 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 RGS19P49795 217 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF41P51814 821 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 IL13RA1P78552 427 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ACY1Q03154 408 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 THEM4Q5T1C6 240 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 PHF19Q5T6S3 580 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ELP2Q6IA86 826 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 OR2W3Q7Z3T1 314 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 C6orf201Q7Z4U5 140 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 COMMD2Q86X83 199 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF101Q8IZC7 436 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 MAML2Q8IZL2 1156 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 CLDN23Q96B33 292 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 NTNG2Q96CW9 530 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 MARS2Q96GW9 593 aaKnown RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 POTEKPQ9BYX7 375 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 RASL12Q9NYN1 266 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 MRPS28Q9Y2Q9 187 aaKnown RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 HS3ST3B1Q9Y662 390 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 TECTAO75443 2155 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 UBE2QL1A1L167 161 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 A6NIZ1 184 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 AQP7P3A6NL99 342 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 DNASE2O00115 360 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 SULT1C2O00338 296 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 MFNGO00587 321 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 SPRY1O43609 319 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ACTL6AO96019 429 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 HPNP05981 417 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 GLI4P10075 376 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 RAB3AP20336 220 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 CXCL12P48061 93 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ACTBP60709 375 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 RAP1BP61224 184 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 RAP1AP62834 184 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 ACTG1P63261 375 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 CLEC18BQ6UXF7 455 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 TFAP2EQ6VUC0 442 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms