RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 UBBP0CG47 229 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 UBCP0CG48 685 aaKnown RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 B4GALT1P15291 398 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 DCAF7P61962 342 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 CLINT1Q14677 625 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ASPHD2Q6ICH7 369 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 OGFOD3Q6PK18 319 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 SYT13Q7L8C5 426 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 P4HA3Q7Z4N8 544 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 C1QL2Q7Z5L3 287 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 SPICQ8N5J4 248 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 OR5L1Q8NGL2 311 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF700Q9H0M5 742 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 FANCFQ9NPI8 374 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 ATPIF1Q9UII2 106 aa11.13□□□□□ -0.63
LMX1A-202ENST00000342310 MRPS17Q9Y2R5 130 aaKnown RBP11.13□□□□□ -0.63
LMX1A-202ENST00000342310 C9orf170A2RU37 121 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 RAB27BO00194 218 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 BET1O15155 118 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF16P17020 682 aaPredicted RBP11.12□□□□□ -0.63
LMX1A-202ENST00000342310 NAGAP17050 411 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 CD80P33681 288 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 OR2B8PP59922 312 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 PDZK1IP1Q13113 114 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 MICBQ29980 383 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 RGS7BPQ6MZT1 257 aaPredicted RBP11.12□□□□□ -0.63
LMX1A-202ENST00000342310 SLAMF9Q96A28 289 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF845Q96IR2 970 aaPredicted RBP11.12□□□□□ -0.63
LMX1A-202ENST00000342310 GAREM1Q9H706 876 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF319Q9P2F9 582 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 DSPP15924 2871 aaKnown RBP11.12□□□□□ -0.63
LMX1A-202ENST00000342310 POU2F2P09086 479 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 CCL4P13236 92 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
LMX1A-202ENST00000342310 ANOS1P23352 680 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 PSMB6P28072 239 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 CAV2P51636 162 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 RAB32Q13637 225 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF684Q5T5D7 378 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 CLRN3Q8NCR9 226 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF385AQ96PM9 386 aaKnown RBP11.12□□□□□ -0.63
LMX1A-202ENST00000342310 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 TNFSF11O14788 317 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 SSX5O60225 188 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 TSPAN2O60636 221 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 CPN1P15169 458 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF14P17017 642 aaPredicted RBP11.12□□□□□ -0.63
LMX1A-202ENST00000342310 CXCL12P48061 93 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 UNC119Q13432 240 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 SLC36A1Q7Z2H8 476 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 LYG2Q86SG7 212 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 OR5L2Q8NGL0 311 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 OR1S1Q8NH92 325 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 ISOC2Q96AB3 205 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 LRFN5Q96NI6 719 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 KIF25Q9UIL4 384 aa11.12□□□□□ -0.63
LMX1A-202ENST00000342310 TRBV5-7A0A0A0MS05 114 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 MFSD2BA6NFX1 497 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 GLB1P16278 677 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 MGMTP16455 207 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 MEF2DQ14814 521 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-202ENST00000342310 OR5M9Q8NGP3 310 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF2Q9BSG1 426 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-202ENST00000342310 FAAP24Q9BTP7 215 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 PAPOLGQ9BWT3 736 aaKnown RBP11.11□□□□□ -0.63
LMX1A-202ENST00000342310 TRAV20A0A0B4J274 112 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 NME2P1O60361 137 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 CLPSP04118 112 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 CSRP2Q16527 193 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 PLEKHN1Q494U1 663 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-202ENST00000342310 PDZD11Q5EBL8 140 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 ZNF837Q96EG3 531 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-202ENST00000342310 GPX7Q96SL4 187 aaPredicted RBP11.11□□□□□ -0.63
LMX1A-202ENST00000342310 RSRP1Q9BUV0 290 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 OR10A2Q9H208 303 aa11.11□□□□□ -0.63
LMX1A-202ENST00000342310 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.11□□□□□ -0.63
LMX1A-202ENST00000342310 OR2M5A3KFT3 312 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 LILRA5A6NI73 299 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 SULT1C2O00338 296 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 MTRF1O75570 445 aaKnown RBP11.1□□□□□ -0.63
LMX1A-202ENST00000342310 EPHA1P21709 976 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 CASRP41180 1078 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 ETV3LQ6ZN32 361 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 C5orf24Q7Z6I8 188 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 KCNRGQ8N5I3 272 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 TMEM217Q8N7C4 229 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 OR5M8Q8NGP6 311 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 ASB10Q8WXI3 467 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 MRPS24Q96EL2 167 aaKnown RBP11.1□□□□□ -0.63
LMX1A-202ENST00000342310 ESRP2Q9H6T0 727 aaKnown RBP11.1□□□□□ -0.63
LMX1A-202ENST00000342310 C12orf10Q9HB07 376 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 NIT2Q9NQR4 276 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 BOD1L1Q8NFC6 3051 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 TICRRQ7Z2Z1 1910 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 THADAQ6YHU6 1953 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 MSGN1A6NI15 193 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 LRP3O75074 770 aa11.1□□□□□ -0.63
LMX1A-202ENST00000342310 EIF3GO75821 320 aaKnown RBP eCLIP11.1□□□□□ -0.63
LMX1A-202ENST00000342310 PCK2Q16822 640 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms