RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PGA3P0DJD8 388 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 AMD1P17707 334 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SPATA45Q537H7 98 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GFI1BQ5VTD9 330 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 PWWP2BQ6NUJ5 590 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 LGI3Q8N145 548 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF709Q8N972 641 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 RNF149Q8NC42 400 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 OR2T10Q8NGZ9 312 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 OR52E5Q8NH55 327 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM239Q8WW34 195 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 WNT2BQ93097 391 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF707Q96C28 371 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TIFAQ96CG3 184 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 G6PC2Q9NQR9 355 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CCL27Q9Y4X3 112 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 NEUROG3Q9Y4Z2 214 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 C5P01031 1676 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FMN2Q9NZ56 1722 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 NWD2Q9ULI1 1742 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TRBV4-1A0A0J9YWV2 114 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FIGNL2A6NMB9 653 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 GJB5O95377 273 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 AQP1P29972 269 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 RAB9AP51151 201 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 MFGE8Q08431 387 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ACTL10Q5JWF8 245 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FRG2Q64ET8 278 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CHST9Q7L1S5 443 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 B3GALNT2Q8NCR0 500 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 OR10P1Q8NGE3 313 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ABHD5Q8WTS1 349 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 DDIT4LQ96D03 193 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FRG2BQ96QU4 278 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM39BQ9GZU3 492 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TBC1D29Q9UFV1 150 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 CGGBP1Q9UFW8 167 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 KDM3BQ7LBC6 1761 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TRBV9A0A0B4J1U6 114 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 J3QW42 95 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF253O75346 499 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 KLF8O95600 359 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FURINP09958 794 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 FCGR2CP31995 323 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 C4orf17Q53FE4 359 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM128Q5BJH2 165 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 AADACL3Q5VUY0 350 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 RGMBQ6NW40 437 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 LBX2Q6XYB7 198 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 THSD4Q6ZMP0 1018 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 DTWD2Q8NBA8 298 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 DVL3Q92997 716 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 BORCS7Q96B45 105 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 SLC35G5Q96KT7 338 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 KLK11Q9UBX7 282 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 UBE2J1Q9Y385 318 aaPredicted RBP3.72□□□□□ -1.81
NEDD4-201ENST00000338963 INSL6Q9Y581 213 aa3.72□□□□□ -1.81
NEDD4-201ENST00000338963 TOPAZ1Q8N9V7 1692 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 LOC105371242A0A075B767 164 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 J3QLW9 94 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 SERPINA7P05543 415 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 CXCL1P09341 107 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 KITLGP21583 273 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 MC4RP32245 332 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 TAS2R30P59541 319 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 HMGCS1Q01581 520 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 ACKR1Q16570 336 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 DOK7Q18PE1 504 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 NBPF12Q5TAG4 269 aaPredicted RBP3.71□□□□□ -1.81
NEDD4-201ENST00000338963 CHRDL2Q6WN34 429 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 PRSS45Q7RTY3 260 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF440Q8IYI8 595 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 TEX26Q8N6G2 289 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 OR5P2Q8WZ92 322 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 SEC22AQ96IW7 307 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 HARBI1Q96MB7 349 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 FAM206AQ9NX38 181 aa3.71□□□□□ -1.81
NEDD4-201ENST00000338963 DDX60Q8IY21 1712 aaKnown RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PEAK1Q9H792 1746 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 A0A1B0GU03 582 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SHISA3A0PJX4 238 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 BLACEA4D250 179 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 OR51F1A6NGY5 319 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 KIAA1324LA8MWY0 1029 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 NPIPB7O75200 414 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 CH25HO95992 272 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 MT-ND6P03923 174 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 CFPP27918 469 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 RAB38P57729 211 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 FAM189BP81408 668 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 UNQ9370/PRO34162Q6UXP9 181 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 RTN4RL1Q86UN2 441 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PNPLA1Q8N8W4 532 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 NKX3-1Q99801 234 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 LINC00470Q9BZP3 86 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PATZ1Q9HBE1 687 aaKnown RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 MRPL16Q9NX20 251 aaKnown RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 P2RX2Q9UBL9 471 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 URGCP-MRPS24S4R325 110 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 A0A1B0GW15 77 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms