RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 EGR3Q06889 387 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 CEBPEQ15744 281 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 ATPAF1Q5TC12 328 aaPredicted RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 CMSS1Q9BQ75 279 aaKnown RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 SARGQ9BW04 601 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 S1PR5Q9H228 398 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 CHRDQ9H2X0 955 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 NIT2Q9NQR4 276 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 MMACHCQ9Y4U1 282 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 ETV7Q9Y603 341 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 COL4A3Q01955 1670 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 C7orf66A4D0T2 115 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 GPR31O00270 319 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 LYPD3O95274 346 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 PDGFBP01127 241 aaPredicted RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 OR8U9P0C7N5 309 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 G0S2P27469 103 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 CD80P33681 288 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 ZNF84P51523 738 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 IKZF1Q13422 519 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 SPATA46Q5T0L3 261 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 ZNF626Q68DY1 528 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 FBXW12Q6X9E4 464 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 TMPPEQ6ZT21 453 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 OR5AS1Q8N127 324 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 SEMA6DQ8NFY4 1073 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 MFSD8Q8NHS3 518 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 NUBPLQ8TB37 319 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 CCDC74BQ96LY2 380 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 HIST1H2AAQ96QV6 131 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 ZNF2Q9BSG1 426 aaPredicted RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 TRAF4Q9BUZ4 470 aaPredicted RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 RPS10P5Q9NQ39 176 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 UBE2J1Q9Y385 318 aaPredicted RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 URGCP-MRPS24S4R325 110 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 TRAV39A0A0B4J263 110 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 NME2P1O60361 137 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 SNAPC5O75971 98 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 MSX1P28360 303 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 DCAF7P61962 342 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 WIPI1Q5MNZ9 446 aaPredicted RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 PLCXD3Q63HM9 321 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 SLC16A14Q7RTX9 510 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 RPS19BP1Q86WX3 136 aaKnown RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 MARC2Q969Z3 335 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 ZNF385AQ96PM9 386 aaKnown RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 PFDN5Q99471 154 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 FAAP24Q9BTP7 215 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 SLC19A3Q9BZV2 496 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 SRPK3Q9UPE1 567 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 MBTPS2O43462 519 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 EIF4E2O60573 245 aaKnown RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 PMS2P2O95744 297 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 MT-ATP6P00846 226 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 FAM157BP0CG42 384 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 RPS4Y1P22090 263 aaKnown RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 FASLGP48023 281 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 SSX2Q16385 188 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 PCK2Q16822 640 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 ZNF565Q8N9K5 539 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 OR1S2Q8NGQ3 325 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 SCARB1Q8WTV0 552 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 MCHR2Q969V1 340 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 NECAB3Q96P71 396 aaPredicted RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 OR10A2Q9H208 303 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 CRLF2Q9HC73 371 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 LANCL2Q9NS86 450 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 PLA2G3Q9NZ20 509 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 MYOTQ9UBF9 498 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 KCNS2Q9ULS6 477 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 KCNIP3Q9Y2W7 256 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 NBEAQ8NFP9 2946 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 MPTX1A8MV57 137 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 HS3ST1O14792 307 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 MGMTP16455 207 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 ID4P47928 161 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 SNTB1Q13884 538 aaKnown RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 C3AR1Q16581 482 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.31□□□□□ -1.24
HPS4-201ENST00000336873 HLA-BQ31612 363 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 PAN3Q58A45 887 aaKnown RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 COL13A1Q5TAT6 717 aaPredicted RBP7.31□□□□□ -1.24
HPS4-201ENST00000336873 H3F3CQ6NXT2 135 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 FAM122BQ7Z309 247 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 KLK13Q9UKR3 277 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 RAB22AQ9UL26 194 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 PCDHB10Q9UN67 800 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 KCNK7Q9Y2U2 307 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 CEP295Q9C0D2 2601 aa7.31□□□□□ -1.24
HPS4-201ENST00000336873 A6NLC8 198 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 M0R135 149 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 RAB27BO00194 218 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 RAD51DO75771 328 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 UBCP0CG48 685 aaKnown RBP7.3□□□□□ -1.24
HPS4-201ENST00000336873 VSIG8P0DPA2 414 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 CD53P19397 219 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 CCR5P51681 352 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 FGL1Q08830 312 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 AAED1Q7RTV5 226 aa7.3□□□□□ -1.24
HPS4-201ENST00000336873 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms