RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.73
HDAC6-201ENST00000334136 KCNG2Q9UJ96 466 aa10.52□□□□□ -0.73
HDAC6-201ENST00000334136 MUC22E2RYF6 1773 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-201ENST00000334136 A0A087WUJ7 227 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF705GA8MUZ8 300 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 SDCBPO00560 298 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 BAMBIQ13145 260 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 CORO6Q6QEF8 472 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 ANGPTL5Q86XS5 388 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 SYT3Q9BQG1 590 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 TCEAL7Q9BRU2 100 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 EXOSC3Q9NQT5 275 aaKnown RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 PURGQ9UJV8 347 aaKnown RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 PCDHB10Q9UN67 800 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 NEUROG3Q9Y4Z2 214 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 SIRT4Q9Y6E7 314 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 LOC102723996A0A087X1L8 192 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 FAM230AA0A1W2PPH8 454 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 OR2M5A3KFT3 312 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 TNFSF11O14788 317 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 NDUFB6O95139 128 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 MGMTP16455 207 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 EPHA1P21709 976 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 ADGRE4PQ86SQ3 457 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 OR52H1Q8NGJ2 320 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 OR2G2Q8NGZ5 317 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 GPR119Q8TDV5 335 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 SCMH1Q96GD3 660 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 MESP1Q9BRJ9 268 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 FKRPQ9H9S5 495 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 FLRT3Q9NZU0 649 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 LSM2Q9Y333 95 aaKnown RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 A0A0B4J2E0 115 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 A0A1B0GX12 115 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 TRIM64BA6NI03 449 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 TRIM77I1YAP6 450 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 TXNDC12O95881 172 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 OR13C7P0DN81 318 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 PSMB6P28072 239 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 BLVRBP30043 206 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 ACSM1Q08AH1 577 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 CLINT1Q14677 625 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 PLA1AQ53H76 456 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 SOHLH1Q5JUK2 328 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 TMPPEQ6ZT21 453 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 OR11H4Q8NGC9 324 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 GLYATL2Q8WU03 294 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 ASB17Q8WXJ9 295 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 UNKLQ9H9P5 680 aaKnown RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 LINC00862A6NCI5 91 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 MAGEA5P43359 124 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 MRPL49Q13405 166 aaKnown RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 RTP5Q14D33 572 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 TOMM34Q15785 309 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 TRILQ7L0X0 811 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 DCXRQ7Z4W1 244 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 BAP18Q8IXM2 172 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 BPIFCQ8NFQ6 507 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 CLCC1Q96S66 551 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 C12orf49Q9H741 205 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 OR5V1Q9UGF6 321 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 ELF5Q9UKW6 265 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 B3GALT5Q9Y2C3 310 aa10.51□□□□□ -0.73
HDAC6-201ENST00000334136 COA3Q9Y2R0 106 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-201ENST00000334136 SPTBN4Q9H254 2564 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 TRAV20A0A0B4J274 112 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 S100PP25815 95 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF93P35789 620 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-201ENST00000334136 NDUFA6P56556 154 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 SLC35D3Q5M8T2 416 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 SEZ6L2Q6UXD5 910 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 CD300LDQ6UXZ3 194 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 NANOS1Q8WY41 292 aaKnown RBP10.5□□□□□ -0.73
HDAC6-201ENST00000334136 EMC6Q9BV81 110 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 FAM212BQ9NTI7 297 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF346Q9UL40 294 aaKnown RBP10.5□□□□□ -0.73
HDAC6-201ENST00000334136 PRELID3BQ9Y3B1 194 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 CENPVL1A0A0U1RR11 272 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 GPR31O00270 319 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 B3GALNT1O75752 331 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 SULT1A3P0DMM9 295 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 SULT1A4P0DMN0 295 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 CD79AP11912 226 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 RAC1P63000 192 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 FAM57BQ71RH2 274 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 SHISA5Q8N114 240 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 NFAM1Q8NET5 270 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-201ENST00000334136 ROBO4Q8WZ75 1007 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 PTP4A1Q93096 173 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF75AQ96N20 296 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 NICN1Q9BSH3 213 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 ADGRL4Q9HBW9 690 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 PLEK2Q9NYT0 353 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 FBXO7Q9Y3I1 522 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 IGHV3-15A0A0B4J1V0 119 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 SLC22A20A6NK97 555 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 CNOT4O95628 575 aaKnown RBP10.5□□□□□ -0.73
HDAC6-201ENST00000334136 DIRAS3O95661 229 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 PGAP1Q75T13 922 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms