RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 PALMDQ9NP74 551 aa8.41□□□□□ -1.06
SYN3-201ENST00000332840 PNRC2Q9NPJ4 139 aaKnown RBP8.41□□□□□ -1.06
SYN3-201ENST00000332840 DLL4Q9NR61 685 aa8.41□□□□□ -1.06
SYN3-201ENST00000332840 DDX28Q9NUL7 540 aaKnown RBP8.41□□□□□ -1.06
SYN3-201ENST00000332840 FAM206AQ9NX38 181 aa8.41□□□□□ -1.06
SYN3-201ENST00000332840 NUFIP1Q9UHK0 495 aaKnown RBP8.41□□□□□ -1.06
SYN3-201ENST00000332840 HHLA2Q9UM44 414 aa8.41□□□□□ -1.06
SYN3-201ENST00000332840 DHDHQ9UQ10 334 aa8.41□□□□□ -1.06
SYN3-201ENST00000332840 CMAHPQ9Y471 501 aa8.41□□□□□ -1.06
SYN3-201ENST00000332840 ATP23Q9Y6H3 246 aa8.41□□□□□ -1.06
SYN3-201ENST00000332840 FREM1Q5H8C1 2179 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 IGHV1-18A0A0C4DH31 117 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SMIM30A4D0T7 59 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 ANKRD61A6NGH8 418 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 NOTOA8MTQ0 251 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 ATP6V1G2-DDX39BF2Z307 99 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SGCEO43556 437 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 UBL3O95164 117 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 CECR9P0C854 216 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 B4GALT1P15291 398 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 CD40LGP29965 261 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 APOBEC3AP31941 199 aaPredicted RBP8.4□□□□□ -1.06
SYN3-201ENST00000332840 TNFSF8P32971 234 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SOX2P48431 317 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 PSMD7P51665 324 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 PPP5CP53041 499 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 DSCR9P59020 149 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 PPP3R1P63098 170 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 NAAAQ02083 359 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 RAB35Q15286 201 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 GSG1Q2KHT4 349 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 ODF4Q2M2E3 257 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SPANXN2Q5MJ10 180 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 DDI2Q5TDH0 399 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SFXN4Q6P4A7 337 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SLC16A14Q7RTX9 510 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 CCDC190Q86UF4 302 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 KRTAP1-3Q8IUG1 177 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 RDH10Q8IZV5 341 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 NUP37Q8NFH4 326 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 OR10AC1Q8NH08 325 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SPTSSAQ969W0 71 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 PPP1R14AQ96A00 147 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 TMEM106AQ96A25 262 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 FBXO17Q96EF6 278 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 Q96MF0 132 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SH3GL3Q99963 347 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 ZCCHC4Q9H5U6 513 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 BRD7Q9NPI1 651 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 PLEK2Q9NYT0 353 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 ADAM30Q9UKF2 790 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 SPEF1Q9Y4P9 236 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 TIMM10BQ9Y5J6 103 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 DSCAMO60469 2012 aa8.4□□□□□ -1.06
SYN3-201ENST00000332840 CHD3Q12873 2000 aaKnown RBP8.4□□□□□ -1.06
SYN3-201ENST00000332840 MXRA5Q9NR99 2828 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 A0A0G2JK05 382 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 LOC107986453A0A1B0GWG9 222 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 E7EQL1 145 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 RNF223E7ERA6 249 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 H7C417 338 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 NCR1O76036 304 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 TTRP02766 147 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 ACSM4P0C7M7 580 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 ZNF32P17041 273 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 APEX1P27695 318 aaKnown RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 OTX1P32242 354 aaPredicted RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 MAGEB1P43366 347 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 CX3CR1P49238 355 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 IDH3GP51553 393 aaPredicted RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 TPTEP56180 551 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 ZNF121P58317 390 aaPredicted RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 RPS23P62266 143 aaKnown RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 SNRPD2P62316 118 aaKnown RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 SPOCK1Q08629 439 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 CEP78Q5JTW2 689 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 IDNKQ5T6J7 187 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 C16orf87Q6PH81 154 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 OR51A4Q8NGJ6 313 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 PGAM5Q96HS1 289 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 COX4I2Q96KJ9 171 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 MDFIQ99750 246 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 SLC30A2Q9BRI3 323 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 REPIN1Q9BWE0 567 aaKnown RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 ZNF442Q9H7R0 627 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 SP140LQ9H930 580 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 ABCB9Q9NP78 766 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 CA10Q9NS85 328 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 ABRACLQ9P1F3 81 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 COMMD3Q9UBI1 195 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 FOXJ3Q9UPW0 622 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 AK6Q9Y3D8 172 aaKnown RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 V9GY05 133 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 ATRQ13535 2644 aa8.39□□□□□ -1.07
SYN3-201ENST00000332840 FBN1P35555 2871 aaKnown RBP8.39□□□□□ -1.07
SYN3-201ENST00000332840 A0A1B0GVI7 797 aa8.38□□□□□ -1.07
SYN3-201ENST00000332840 KIAA1324LA8MWY0 1029 aaPredicted RBP8.38□□□□□ -1.07
SYN3-201ENST00000332840 B9A039 149 aa8.38□□□□□ -1.07
SYN3-201ENST00000332840 F5H5K5 113 aa8.38□□□□□ -1.07
SYN3-201ENST00000332840 J3QRK9 145 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms