RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 MAP2K3P46734 347 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 MTNR1BP49286 362 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 CLDN12P56749 244 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 RIPPLY1Q0D2K3 151 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 C3orf36Q3SXR2 165 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 PAMR1Q6UXH9 720 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 GTF3AQ92664 365 aaKnown RBP13.09□□□□□ -0.31
PRPF3-201ENST00000324862 PIGTQ969N2 578 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 LOC390937A0A1W2PQ73 354 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 A1L4Q6 167 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 SHISA9B4DS77 424 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 GMDSO60547 372 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 RAF1P04049 648 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 RAB3BP20337 219 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 DDOSTP39656 456 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 FBXW12Q6X9E4 464 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 RFT1Q96AA3 541 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 SLC25A46Q96AG3 418 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 PIK3IP1Q96FE7 263 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 PAPOLGQ9BWT3 736 aaKnown RBP13.09□□□□□ -0.31
PRPF3-201ENST00000324862 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 FGF23Q9GZV9 251 aaPredicted RBP13.09□□□□□ -0.31
PRPF3-201ENST00000324862 CA10Q9NS85 328 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 POU2F3Q9UKI9 436 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 PKDREJQ9NTG1 2253 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 HELZ2Q9BYK8 2649 aaKnown RBP13.08□□□□□ -0.32
PRPF3-201ENST00000324862 TRAV1-2A0A0B4J238 106 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 CA6P23280 308 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 KIR2DL3P43628 341 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 RGS7BPQ6MZT1 257 aaPredicted RBP13.08□□□□□ -0.32
PRPF3-201ENST00000324862 OR1M1Q8NGA1 313 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 OR5D14Q8NGL3 314 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 CHST5Q9GZS9 411 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 SLIRPQ9GZT3 109 aaKnown RBP13.08□□□□□ -0.32
PRPF3-201ENST00000324862 ZCCHC4Q9H5U6 513 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 ESRP2Q9H6T0 727 aaKnown RBP13.08□□□□□ -0.32
PRPF3-201ENST00000324862 MOV10Q9HCE1 1003 aaKnown RBP13.08□□□□□ -0.32
PRPF3-201ENST00000324862 PLEKHB1Q9UF11 243 aaPredicted RBP13.08□□□□□ -0.32
PRPF3-201ENST00000324862 ATP23Q9Y6H3 246 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 IL1AP01583 271 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 SELEP16581 610 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 HES5Q5TA89 166 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 CRIP3Q6Q6R5 217 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 OR5D18Q8NGL1 313 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 UBASH3BQ8TF42 649 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 DACH2Q96NX9 599 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 KCNK15Q9H427 330 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 MSL2Q9HCI7 577 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 CKLFQ9UBR5 152 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 DAPK2Q9UIK4 370 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 ZNF391Q9UJN7 358 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 CSMD2Q7Z408 3487 aa13.08□□□□□ -0.32
PRPF3-201ENST00000324862 H0YL77 283 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 ATF1P18846 271 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 FSTP19883 344 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 LOXP28300 417 aaPredicted RBP13.07□□□□□ -0.32
PRPF3-201ENST00000324862 GLRXP35754 106 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 ZNF529Q6P280 563 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 PHYHIPQ92561 330 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 HAVCR1Q96D42 359 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 MRPL37Q9BZE1 423 aaKnown RBP13.07□□□□□ -0.32
PRPF3-201ENST00000324862 NGBQ9NPG2 151 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 ZNF816-ZNF321PA0A0X1KG74 233 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 A0A1W2PPR1 153 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 J3QW42 95 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 SULT1B1O43704 296 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 PAHP00439 452 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 NRASP01111 189 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 RAB3AP20336 220 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 CFL1P23528 166 aaKnown RBP13.07□□□□□ -0.32
PRPF3-201ENST00000324862 PPP3R1P63098 170 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 SFXN4Q6P4A7 337 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 MOB3CQ70IA8 216 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 LILRB1Q8NHL6 650 aaPredicted RBP13.07□□□□□ -0.32
PRPF3-201ENST00000324862 HPSE2Q8WWQ2 592 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 PURGQ9UJV8 347 aaKnown RBP13.07□□□□□ -0.32
PRPF3-201ENST00000324862 FOXJ3Q9UPW0 622 aa13.07□□□□□ -0.32
PRPF3-201ENST00000324862 TACC2O95359 2948 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 NBPF19A0A087WUL8 3843 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 IGKV1-27A0A075B6S5 117 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 FAM230AA0A1W2PPH8 454 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 ANXA2P2A6NMY6 339 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 E7EQL1 145 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 C3orf80F5H4A9 247 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 RAC2P15153 192 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 ZNF12P17014 697 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 IGFBP2P18065 325 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 PRDX4Q13162 271 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 ZNF718Q3SXZ3 478 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 IDNKQ5T6J7 187 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 TMEM42Q69YG0 159 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 Q6ZR03 302 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 JAGN1Q8N5M9 183 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 OR10AD1Q8NGE0 317 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
PRPF3-201ENST00000324862 PLATP00750 562 aa13.05□□□□□ -0.32
PRPF3-201ENST00000324862 CD3EP07766 207 aa13.05□□□□□ -0.32
PRPF3-201ENST00000324862 HCKP08631 526 aa13.05□□□□□ -0.32
PRPF3-201ENST00000324862 AZGP1P25311 298 aaKnown RBP13.05□□□□□ -0.32
PRPF3-201ENST00000324862 GCH1P30793 250 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms