RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TMEFF1Q8IYR6 380 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 SLC22A18ASQ8N1D0 253 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 EID2Q8N6I1 236 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 Q8WTZ3 238 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 SMIM3Q9BZL3 60 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 SYT4Q9H2B2 425 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 MTFP1Q9UDX5 166 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 APOBEC3BQ9UH17 382 aaKnown RBP9.2□□□□□ -0.94
SF3B2-201ENST00000322535 MRPS33Q9Y291 106 aaKnown RBP9.2□□□□□ -0.94
SF3B2-201ENST00000322535 V9GYS6 101 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 PRAMEF26H0Y7S4 382 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 HMGN4O00479 90 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 MAN2B1O00754 1011 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 IGHV4-34P06331 123 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 MELTFP08582 738 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 ARR3P36575 388 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 GALNT16Q8N428 558 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 PAQR4Q8N4S7 273 aaPredicted RBP9.2□□□□□ -0.94
SF3B2-201ENST00000322535 LINC01555Q8NAE3 123 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 STXBP6Q8NFX7 210 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 ZNF596Q8TC21 504 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 TMEM255BQ8WV15 326 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 HAVCR1Q96D42 359 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 ZMYND19Q96E35 227 aaPredicted RBP9.2□□□□□ -0.94
SF3B2-201ENST00000322535 SHDQ96IW2 340 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 WFIKKN1Q96NZ8 548 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 SLC2A4RGQ9NR83 387 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 MRPL22Q9NWU5 206 aaKnown RBP9.2□□□□□ -0.94
SF3B2-201ENST00000322535 KCNE5Q9UJ90 142 aa9.2□□□□□ -0.94
SF3B2-201ENST00000322535 SLC22A31A6NKX4 558 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 PIN1P1O15428 100 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 RAMP1O60894 148 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 ONECUT2O95948 504 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 LCATP04180 440 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 GABRR1P24046 479 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 EFNB2P52799 333 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 LTBQ06643 244 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 SRSF5Q13243 272 aaKnown RBP9.19□□□□□ -0.94
SF3B2-201ENST00000322535 GUK1Q16774 197 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 HAGHQ16775 308 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 AMZ1Q400G9 498 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 LDLRAD2Q5SZI1 272 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 KDM8Q8N371 416 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 ZSCAN4Q8NAM6 433 aaPredicted RBP9.19□□□□□ -0.94
SF3B2-201ENST00000322535 MUCL1Q96DR8 90 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 PRRC1Q96M27 445 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 DPH1Q9BZG8 443 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 PCED1AQ9H1Q7 454 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 KCNJ16Q9NPI9 418 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 CYTL1Q9NRR1 136 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 PRR13Q9NZ81 148 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 SRPX2O60687 465 aaPredicted RBP9.19□□□□□ -0.94
SF3B2-201ENST00000322535 DFFBO76075 338 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 GLSO94925 669 aaPredicted RBP9.19□□□□□ -0.94
SF3B2-201ENST00000322535 TDGF1P13385 188 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 COMPP49747 757 aaPredicted RBP9.19□□□□□ -0.94
SF3B2-201ENST00000322535 TAS2R43P59537 309 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 IL13RA1P78552 427 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 MOGAT2Q3SYC2 334 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 NKAIN1Q4KMZ8 207 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 SLC22A6Q4U2R8 563 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 MBOAT2Q6ZWT7 520 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 OVCH1Q7RTY7 1134 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 OR13C9Q8NGT0 318 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 RNASEH2CQ8TDP1 164 aaKnown RBP9.19□□□□□ -0.94
SF3B2-201ENST00000322535 TAF9BQ9HBM6 251 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 HAO2Q9NYQ3 351 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 UPB1Q9UBR1 384 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 TMED3Q9Y3Q3 217 aa9.19□□□□□ -0.94
SF3B2-201ENST00000322535 PRAMEF27A3QJZ7 478 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 NPIPA2E9PIF3 369 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 J3QRE1 110 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 HNRNPA2B1P22626 353 aaKnown RBP9.18□□□□□ -0.94
SF3B2-201ENST00000322535 PPP1R1AQ13522 171 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 CNN3Q15417 329 aaKnown RBP9.18□□□□□ -0.94
SF3B2-201ENST00000322535 MIDNQ504T8 468 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 C1orf194Q5T5A4 169 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 SHISA5Q8N114 240 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 GABRG1Q8N1C3 465 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 OR10G6Q8NH81 332 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 OR2V1Q8NHB1 315 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 MFSD8Q8NHS3 518 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 TAAR2Q9P1P5 351 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 ST6GALNAC2Q9UJ37 374 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 POLR3KQ9Y2Y1 108 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-201ENST00000322535 KIR2DL5BA0A0G2JN68 375 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 KIR2DL5BA0A0G2JPC4 375 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 A0A1B0GTI1 187 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 B4GALT2O60909 372 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 EPPINO95925 133 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 HKR1P10072 659 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 PRPS1P60891 318 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 UBE2V1Q13404 147 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 ZNF627Q7L945 461 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 GRINAQ7Z429 371 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 KIR2DL5AQ8N109 375 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 OR51D1Q8NGF3 324 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 OR5L2Q8NGL0 311 aa9.18□□□□□ -0.94
SF3B2-201ENST00000322535 MOAP1Q96BY2 351 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms