RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 HS3ST5Q8IZT8 346 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 GALNT4Q8N4A0 578 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 OR1M1Q8NGA1 313 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 SGMS2Q8NHU3 365 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 ZNF48Q96MX3 618 aaPredicted RBP14.76□□□□□ -0.05
TPM1-203ENST00000317516 DUX5Q96PT3 197 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 AMELYQ99218 206 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 KAAG1Q9UBP8 84 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 CTSZQ9UBR2 303 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 LAMP5Q9UJQ1 280 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 POMPQ9Y244 141 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 MPC1Q9Y5U8 109 aa14.76□□□□□ -0.05
TPM1-203ENST00000317516 ZNF879B4DU55 563 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 C22orf46C9J442 243 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 P2RY10O00398 339 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 TMPRSS2O15393 492 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 SELENOFO60613 162 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 RNASE1P07998 156 aaKnown RBP14.75□□□□□ -0.05
TPM1-203ENST00000317516 CFHR2P36980 270 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 SNAPC1Q16533 368 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 KCTD18Q6PI47 426 aaPredicted RBP14.75□□□□□ -0.05
TPM1-203ENST00000317516 KRT77Q7Z794 578 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 FAM90A1Q86YD7 464 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 LRRC29Q8WV35 223 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 ITFG2Q969R8 447 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 ZDHHC16Q969W1 377 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 HIST1H2AAQ96QV6 131 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 PCGF1Q9BSM1 259 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 RTL8AQ9BWD3 113 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 SLC25A19Q9HC21 320 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 PAPOLBQ9NRJ5 636 aaKnown RBP14.75□□□□□ -0.05
TPM1-203ENST00000317516 ZNF319Q9P2F9 582 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 RHBDD3Q9Y3P4 386 aa14.75□□□□□ -0.05
TPM1-203ENST00000317516 TOX4O94842 621 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 ALOX5APP20292 161 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 HOXA4Q00056 320 aaPredicted RBP14.74□□□□□ -0.05
TPM1-203ENST00000317516 SLC9A3R2Q15599 337 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 METTL11BQ5VVY1 283 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 DEGS2Q6QHC5 323 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 SLC36A1Q7Z2H8 476 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 C11orf53Q8IXP5 236 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 C12orf43Q96C57 262 aaKnown RBP14.74□□□□□ -0.05
TPM1-203ENST00000317516 SLC7A6OSQ96CW6 309 aaPredicted RBP14.74□□□□□ -0.05
TPM1-203ENST00000317516 PRRG3Q9BZD7 231 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 YIPF3Q9GZM5 350 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 RASSF4Q9H2L5 321 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 TVP23BQ9NYZ1 205 aa14.74□□□□□ -0.05
TPM1-203ENST00000317516 ACOD1A6NK06 481 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 TMEM210A6NLX4 147 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 DVL1O14640 695 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 CST4P01036 141 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 CRISP1P54107 249 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 PSMA6P60900 246 aaKnown RBP14.73□□□□□ -0.05
TPM1-203ENST00000317516 APOFQ13790 326 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 PDCD1Q15116 288 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 LCN1P1Q5VSP4 162 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 TMEM236Q5W0B7 351 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 WDR82Q6UXN9 313 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 BTN2A1Q7KYR7 527 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 C1orf147Q96MC9 270 aaPredicted RBP14.73□□□□□ -0.05
TPM1-203ENST00000317516 WDFY2Q96P53 400 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 TEAD3Q99594 435 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 MROQ9BYG7 248 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 NOX4Q9NPH5 578 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 TMEM14AQ9Y6G1 99 aa14.73□□□□□ -0.05
TPM1-203ENST00000317516 IGHV3OR15-7A0A075B7D8 119 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 CDIPTO14735 213 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 GPR37O15354 613 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 GSC2O15499 205 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 SLC2A5P22732 501 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 RASSF2P50749 326 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 ESRRGP62508 458 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 CSNK2BP67870 215 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 IL13RA1P78552 427 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 POU4F2Q12837 409 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 PRDX4Q13162 271 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 C16orf87Q6PH81 154 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 SHISA2Q6UWI4 295 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 BRD3OSQ6XYD6 125 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 KCTD8Q6ZWB6 473 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 WDR86Q86TI4 376 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 BBS1Q8NFJ9 593 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 FAM81AQ8TBF8 368 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 GATAD2BQ8WXI9 593 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 ASB17Q8WXJ9 295 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 PIGCQ92535 297 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 ITPKCQ96DU7 683 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 RNF170Q96K19 258 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 ZNF747Q9BV97 191 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 TLNRD1Q9H1K6 362 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 PRDM13Q9H4Q3 707 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 CNTD2Q9H8S5 307 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 SMURF1Q9HCE7 757 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 H2AFY2Q9P0M6 372 aaPredicted RBP14.72□□□□□ -0.05
TPM1-203ENST00000317516 LRP12Q9Y561 859 aa14.72□□□□□ -0.05
TPM1-203ENST00000317516 ZNF850A8MQ14 1090 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 NDUFB3O43676 98 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 ZNF254O75437 659 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 EGR1P18146 543 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 MAP2K3P46734 347 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms