RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 MRPS18BQ9Y676 258 aaKnown RBP13.84□□□□□ -0.19
UBAP1-201ENST00000297661 OPN1LWP04000 364 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 CD38P28907 300 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 SLC6A9P48067 706 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 DVL1P1P54792 670 aaPredicted RBP13.84□□□□□ -0.19
UBAP1-201ENST00000297661 MEF2DQ14814 521 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 C1orf140Q5VVS0 124 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 CDPF1Q6NVV7 123 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 SSX9Q7RTT3 188 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 GKN2Q86XP6 184 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 JAGN1Q8N5M9 183 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 BHLHE23Q8NDY6 225 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 ASB5Q8WWX0 329 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 CMKLR1Q99788 373 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 C20orf24Q9BUV8 137 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 OPA3Q9H6K4 179 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 TUBA4BQ9H853 241 aa13.84□□□□□ -0.19
UBAP1-201ENST00000297661 PI4KAP42356 2102 aa13.83□□□□□ -0.19
UBAP1-201ENST00000297661 IGKV3D-11A0A0A0MRZ8 115 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 IGLV1-36A0A0B4J1U3 117 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 IGHV1OR15-9A0A0B4J2B8 117 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 METTL21EPA6NDL7 271 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 M0R036 132 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 DUS4LO95620 317 aaKnown RBP13.83□□□□□ -0.2
UBAP1-201ENST00000297661 CD63P08962 238 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 SP9P0CG40 484 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 GSK3AP49840 483 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 PMPCAQ10713 525 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 TOMM20Q15388 145 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 FAM166AQ6J272 317 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 STX12Q86Y82 276 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 DMRTC2Q8IXT2 367 aaPredicted RBP13.83□□□□□ -0.2
UBAP1-201ENST00000297661 ZNF383Q8NA42 475 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 ZNF519Q8TB69 540 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 C8orf44Q96CB5 159 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 SLC25A44Q96H78 314 aaPredicted RBP13.83□□□□□ -0.2
UBAP1-201ENST00000297661 C14orf144Q96I85 54 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 CCNL2Q96S94 520 aaPredicted RBP13.83□□□□□ -0.2
UBAP1-201ENST00000297661 NMES1Q9C002 83 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 SLC2A8Q9NY64 477 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 FER1L5A0AVI2 2057 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 IGKV1D-43A0A0B4J1Z2 117 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 EFSO43281 561 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 TSPAN2O60636 221 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 STK17BO94768 372 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 YIF1AO95070 293 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 PGCP20142 388 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 ITGA3P26006 1051 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 SLC6A8P48029 635 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 CFHR1Q03591 330 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 SGCBQ16585 318 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 AWAT2Q6E213 333 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 BTNL8Q6UX41 500 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 ZDHHC22Q8N966 263 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 OR10H5Q8NGA6 315 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 RNF128Q8TEB7 428 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 SLAMF9Q96A28 289 aa13.83□□□□□ -0.2
UBAP1-201ENST00000297661 DBX1A6NMT0 343 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 ARRB1P49407 418 aaPredicted RBP13.82□□□□□ -0.2
UBAP1-201ENST00000297661 PPP1R3BQ86XI6 285 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 CENPMQ9NSP4 180 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 MED29Q9NX70 200 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 OR5AC2Q9NZP5 309 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 ZNF107Q9UII5 783 aaPredicted RBP13.82□□□□□ -0.2
UBAP1-201ENST00000297661 VDAC3Q9Y277 283 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 KMT2EQ8IZD2 1858 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 ALG1L2C9J202 215 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 ZNF354AO60765 605 aaPredicted RBP13.82□□□□□ -0.2
UBAP1-201ENST00000297661 ARG1P05089 322 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 TDGF1P13385 188 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 RIDAP52758 137 aaKnown RBP13.82□□□□□ -0.2
UBAP1-201ENST00000297661 ACBD4Q8NC06 268 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 ZNF775Q96BV0 537 aaPredicted RBP13.82□□□□□ -0.2
UBAP1-201ENST00000297661 CMBLQ96DG6 245 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 OR5B2Q96R09 309 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 CDC6Q99741 560 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 VN1R1Q9GZP7 353 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 RTTNQ86VV8 2226 aa13.82□□□□□ -0.2
UBAP1-201ENST00000297661 LILRA5A6NI73 299 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 H3BMH7 237 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 PLPP3O14495 311 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 OR8U9P0C7N5 309 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 FBLP22087 321 aaKnown RBP13.81□□□□□ -0.2
UBAP1-201ENST00000297661 HTR2CP28335 458 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 CX3CR1P49238 355 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 CYCSP99999 105 aaKnown RBP13.81□□□□□ -0.2
UBAP1-201ENST00000297661 RTN4RL2Q86UN3 420 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 FAM219AQ8IW50 185 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 OR13C3Q8NGS6 347 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 OR8U1Q8NH10 309 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 FAM46BQ96A09 425 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 MARS2Q96GW9 593 aaKnown RBP13.81□□□□□ -0.2
UBAP1-201ENST00000297661 NUDT22Q9BRQ3 303 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 TXNIPQ9H3M7 391 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 SMOC1Q9H4F8 434 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 RGCCQ9H4X1 137 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 FSCN3Q9NQT6 498 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 ASCC3Q8N3C0 2202 aaKnown RBP13.81□□□□□ -0.2
UBAP1-201ENST00000297661 IGLV3-19P01714 112 aa13.81□□□□□ -0.2
UBAP1-201ENST00000297661 GALNSP34059 522 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms