RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PAMR1Q6UXH9 720 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 LRP11Q86VZ4 500 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 MS4A15Q8N5U1 240 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 POC5Q8NA72 575 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 ITPKCQ96DU7 683 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 PSMG3-AS1Q96PY0 264 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 SPOCK3Q9BQ16 436 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 TPK1Q9H3S4 243 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 MOB1AQ9H8S9 216 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 PLEKHB1Q9UF11 243 aaPredicted RBP13.02□□□□□ -0.33
CCDC140-201ENST00000295226 ADAM30Q9UKF2 790 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 RNF115Q9Y4L5 304 aa13.02□□□□□ -0.33
CCDC140-201ENST00000295226 LOC107986453A0A1B0GWG9 222 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 E7EQL1 145 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 ICMTO60725 284 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 PSMD7P51665 324 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 MXD1Q05195 221 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 MALLQ13021 153 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 DAZAP2Q15038 168 aaPredicted RBP13.01□□□□□ -0.33
CCDC140-201ENST00000295226 ALKBH6Q3KRA9 238 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 GDPD1Q8N9F7 314 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 OR5L1Q8NGL2 311 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 TMEM171Q8WVE6 324 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 CMBLQ96DG6 245 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 MARS2Q96GW9 593 aaKnown RBP13.01□□□□□ -0.33
CCDC140-201ENST00000295226 BCL2L14Q9BZR8 327 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 SPEF1Q9Y4P9 236 aa13.01□□□□□ -0.33
CCDC140-201ENST00000295226 A0A0U1RQV5 110 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 TMEM212A6NML5 194 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 A6NNC1 897 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 COX6B1P14854 86 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 RANBP1P43487 201 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 SOX2P48431 317 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 RPS11P62280 158 aaKnown RBP eCLIP13□□□□□ -0.33
CCDC140-201ENST00000295226 FAM3AP98173 230 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 TNK1Q13470 666 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 OR2T2Q6IF00 324 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 ZNF544Q6NX49 715 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 ZNF704Q6ZNC4 412 aaPredicted RBP13□□□□□ -0.33
CCDC140-201ENST00000295226 TPRA1Q86W33 373 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 KLF14Q8TD94 323 aaPredicted RBP13□□□□□ -0.33
CCDC140-201ENST00000295226 KCTD12Q96CX2 325 aaKnown RBP13□□□□□ -0.33
CCDC140-201ENST00000295226 COMMD4Q9H0A8 199 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 CA10Q9NS85 328 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 DUSP13Q9UII6 198 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 ZNF281Q9Y2X9 895 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 V9GYH0 126 aa13□□□□□ -0.33
CCDC140-201ENST00000295226 A0A1W2PPK0 400 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 ANKRD61A6NGH8 418 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 SYT7O43581 403 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 LILRA1O75019 489 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 IGLV3-1P01715 115 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 ACKR3P25106 362 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 GLRXP35754 106 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 GSK3AP49840 483 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 PSG7Q13046 419 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 DMRTC1Q5HYR2 192 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 RGS7BPQ6MZT1 257 aaPredicted RBP12.99□□□□□ -0.33
CCDC140-201ENST00000295226 PGAP1Q75T13 922 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 MRPL21Q7Z2W9 205 aaKnown RBP12.99□□□□□ -0.33
CCDC140-201ENST00000295226 OR5AS1Q8N127 324 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 BHLHE23Q8NDY6 225 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 SPSB4Q96A44 273 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 ORAI1Q96D31 301 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 SYT3Q9BQG1 590 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 TMEM204Q9BSN7 226 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 REPIN1Q9BWE0 567 aaKnown RBP12.99□□□□□ -0.33
CCDC140-201ENST00000295226 PPP1R3EQ9H7J1 279 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 MYEF2Q9P2K5 600 aaKnown RBP12.99□□□□□ -0.33
CCDC140-201ENST00000295226 KCNN3Q9UGI6 736 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 hCG_38984A0A1B0GV85 526 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 A0A1B0GVI7 797 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 XRCC2O43543 280 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 ISG15P05161 165 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 UBCP0CG48 685 aaKnown RBP12.99□□□□□ -0.33
CCDC140-201ENST00000295226 TMEM244Q5VVB8 128 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 SNX29P2Q8IUI4 249 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 LAX1Q8IWV1 398 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 NUP37Q8NFH4 326 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 PHYHIPQ92561 330 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC140-201ENST00000295226 ABCB9Q9NP78 766 aa12.99□□□□□ -0.33
CCDC140-201ENST00000295226 CISD1Q9NZ45 108 aaKnown RBP12.99□□□□□ -0.33
CCDC140-201ENST00000295226 FABP12A6NFH5 140 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 GGT3PA6NGU5 568 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 CLEC2LP0C7M8 214 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 MYL9P24844 172 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 SCN1BQ07699 218 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 ADIPOQQ15848 244 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 ZNF718Q3SXZ3 478 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
CCDC140-201ENST00000295226 FAM27D1Q5T7N8 215 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 UNQ6126/PRO20091Q6UXV3 157 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 FBXW12Q6X9E4 464 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 TMEM91Q6ZNR0 172 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 OR56B2PQ8NGI1 322 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 OR13C3Q8NGS6 347 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 OR14K1Q8NGZ2 314 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 DIRAS2Q96HU8 199 aa12.98□□□□□ -0.33
CCDC140-201ENST00000295226 OR14A2Q96R54 314 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms