RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SLC5A6Q9Y289 635 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 FREM2Q5SZK8 3169 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 FREM3P0C091 2139 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 TRAV6A0A075B6T7 132 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ACOD1A6NK06 481 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 SHOXO15266 292 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 WNT11O96014 354 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 TFP02787 698 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 LPLP06858 475 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 AGAP20933 346 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 SLC25A35Q3KQZ1 300 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 TSPO2Q5TGU0 170 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 OR52W1Q6IF63 320 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 GDPD3Q7L5L3 318 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 FAM169BQ8N8A8 192 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 PHF3Q92576 2039 aaKnown RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 RAB39BQ96DA2 213 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 DCSTAMPQ9H295 470 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 RDH8Q9NYR8 311 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 SELENOFO60613 162 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 UBL3O95164 117 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 MT-ND2P03891 347 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 SLC2A2P11168 524 aaPredicted RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 AKR1C4P17516 323 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF85Q03923 595 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 DCTN2Q13561 401 aaKnown RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 PPA1Q15181 289 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF511Q8NB15 262 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 TRMT61AQ96FX7 289 aaKnown RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 TSSK2Q96PF2 358 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ACOT13Q9NPJ3 140 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 TAS2R16Q9NYV7 291 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 MSTNO14793 375 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 RBBP9O75884 186 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 IFNA17P01571 189 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 OR8G3PP0DMU2 310 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 COX5BP10606 129 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 NKX6-1P78426 367 aaPredicted RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 CCDC58Q4VC31 144 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 RNASE10Q5GAN6 216 aaKnown RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 C22orf42Q6IC83 251 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 INO80EQ8NBZ0 244 aaPredicted RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF485Q8NCK3 441 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 RPS4Y2Q8TD47 263 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 NIPAL2Q9H841 368 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 HRASLSQ9HDD0 168 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 SLC7A10Q9NS82 523 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF69Q9UC07 566 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 AK6Q9Y3D8 172 aaKnown RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 SSX5O60225 188 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 SNAPC5O75971 98 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ALOX5APP20292 161 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 RPS27P42677 84 aaKnown RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 RORCP51449 518 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 WNT4P56705 351 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 GPR50Q13585 617 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 SYT6Q5T7P8 510 aaPredicted RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 SLC22A24Q8N4F4 322 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 OR4F15Q8NGB8 312 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 RNF133Q8WVZ7 376 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ASB5Q8WWX0 329 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 CCL17Q92583 94 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 C1orf198Q9H425 327 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 UBTD1Q9HAC8 227 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 PLEKHA3Q9HB20 300 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 FZR1Q9UM11 496 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 AMDHD2Q9Y303 409 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 NUDT19A8MXV4 375 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF593O00488 134 aaPredicted RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 SPRY3O43610 288 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 TSPAN9O75954 239 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 EIF4EP06730 217 aaKnown RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ARR3P36575 388 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ALDH3B2P48448 385 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 F2RL1P55085 397 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 HNRNPA0Q13151 305 aaKnown RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ENDOGQ14249 297 aaKnown RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 CEACAM16Q2WEN9 425 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 XAF1Q6GPH4 301 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 FDX2Q6P4F2 183 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 FAM185AQ8N0U4 392 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 GABRG1Q8N1C3 465 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 RND1Q92730 232 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 RNF170Q96K19 258 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ALG8Q9BVK2 526 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 GNB4Q9HAV0 340 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ELOVL3Q9HB03 270 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ATRQ13535 2644 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 A0A0G2JNJ9 132 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 A0A1W2PQL4 384 aaPredicted RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 CLDN25C9JDP6 229 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 LIMS3P0CW19 117 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 LIMS4P0CW20 117 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 DEFA4P12838 97 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 CAV2P51636 162 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 GRB2P62993 217 aaKnown RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 EMX1Q04741 257 aaPredicted RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 FBXL19-AS1Q494R0 122 aa7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF322Q6U7Q0 402 aaPredicted RBP7.37□□□□□ -1.23
PTPDC1-201ENST00000288976 TPRA1Q86W33 373 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms