RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 DEFB133Q30KQ1 61 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 LBHQ53QV2 105 aaPredicted RBP6.78□□□□□ -1.32
TRIM6-201ENST00000278302 MESTQ5EB52 335 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 LINC01590Q5TEZ4 76 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 SLC25A42Q86VD7 318 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 C1QL4Q86Z23 238 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 CARFQ8N187 725 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 LRRC18Q8N456 261 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 TSTD1Q8NFU3 115 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 PACRGQ96M98 296 aaPredicted RBP6.78□□□□□ -1.32
TRIM6-201ENST00000278302 CCNL2Q96S94 520 aaPredicted RBP6.78□□□□□ -1.32
TRIM6-201ENST00000278302 MMP25Q9NPA2 562 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 HIF3AQ9Y2N7 669 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 HS3ST3B1Q9Y662 390 aa6.78□□□□□ -1.32
TRIM6-201ENST00000278302 CDC14CA4D256 554 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 C11orf98E9PRG8 122 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 H0YIG0 161 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 HCRTR2O43614 444 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 HLA-DQA2P01906 255 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 IL12BP29460 328 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 CD200P41217 278 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 FASLGP48023 281 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 SLC25A1P53007 311 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 RPL18Q07020 188 aaKnown RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 AKR1C8PQ5T2L2 129 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 COL13A1Q5TAT6 717 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 ZNF676Q8N7Q3 588 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 TMEM229BQ8NBD8 167 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 OR6X1Q8NH79 312 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 Q8WTZ3 238 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 PTPMT1Q8WUK0 201 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 CCDC74AQ96AQ1 378 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 KTI12Q96EK9 354 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 SLC46A1Q96NT5 459 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 OR5B2Q96R09 309 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 GPX7Q96SL4 187 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 LPAR4Q99677 370 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 MRI1Q9BV20 369 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 LMAN1LQ9HAT1 526 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 OR14J1Q9UGF5 321 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 GON4LQ3T8J9 2241 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 SZT2Q5T011 3432 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 TGIF2-C20orf24A0A0A6YYL0 155 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 A6NNC1 897 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 ZNF705GA8MUZ8 300 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 ATXN7O15265 892 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 CYB5BO43169 146 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 CDC40O60508 579 aaKnown RBP eCLIP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 STK17BO94768 372 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 CLPSP04118 112 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 MELTFP08582 738 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 SPARCP09486 303 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 CD38P28907 300 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 DHPSP49366 369 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 SLC37A1P57057 533 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 SMAD4Q13485 552 aaKnown RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 RAB32Q13637 225 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 RNASE10Q5GAN6 216 aaKnown RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 OR2T2Q6IF00 324 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 FAM174AQ8TBP5 190 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 TSLPQ969D9 159 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 S100A13Q99584 98 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 SLC5A7Q9GZV3 580 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 COMMD4Q9H0A8 199 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 KCNJ16Q9NPI9 418 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 CUTCQ9NTM9 273 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 SLC2A8Q9NY64 477 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 MRM2Q9UI43 246 aaKnown RBP6.77□□□□□ -1.33
TRIM6-201ENST00000278302 GTF2A1LQ9UNN4 478 aa6.77□□□□□ -1.33
TRIM6-201ENST00000278302 TLCD2A6NGC4 264 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 DOK2O60496 412 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 ZNF354AO60765 605 aaPredicted RBP6.76□□□□□ -1.33
TRIM6-201ENST00000278302 IGLV3-19P01714 112 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 CCKBRP32239 447 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 GALNSP34059 522 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 SULT1A2P50226 295 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 ERVFRD-1P60508 538 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 EGR4Q05215 589 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 ZP2Q05996 745 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 PPA1Q15181 289 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 TOMM34Q15785 309 aaPredicted RBP6.76□□□□□ -1.33
TRIM6-201ENST00000278302 LANCL3Q6ZV70 420 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 DPY19L4Q7Z388 723 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 PRR18Q8N4B5 295 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 SMRP1Q8NCR6 262 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 MARCH1Q8TCQ1 289 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 TSEN15Q8WW01 171 aaKnown RBP6.76□□□□□ -1.33
TRIM6-201ENST00000278302 TAAR8Q969N4 342 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 CMBLQ96DG6 245 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 GALNT14Q96FL9 552 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 NDUFAF3Q9BU61 184 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 DDA1Q9BW61 102 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 SNHG12Q9BXW3 62 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 GPR27Q9NS67 375 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 CGGBP1Q9UFW8 167 aaPredicted RBP6.76□□□□□ -1.33
TRIM6-201ENST00000278302 IL17BQ9UHF5 180 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 A0A087WZY1 265 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 XKRYO14609 159 aa6.76□□□□□ -1.33
TRIM6-201ENST00000278302 EFSO43281 561 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms