RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 UBE2V2Q15819 145 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 CEP78Q5JTW2 689 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 FBXW12Q6X9E4 464 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 SERPINA12Q8IW75 414 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 DMRTC2Q8IXT2 367 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PARP16Q8N5Y8 322 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 DYNC2LI1Q8TCX1 351 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PIK3IP1Q96FE7 263 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 DACH2Q96NX9 599 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 BCL7BQ9BQE9 202 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 BCL2L14Q9BZR8 327 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 ESRP2Q9H6T0 727 aaKnown RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 TCF7L1Q9HCS4 588 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 NGBQ9NPG2 151 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 MYEF2Q9P2K5 600 aaKnown RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 DUSP13Q9UII6 198 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 GPR160Q9UJ42 338 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 ATP23Q9Y6H3 246 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 TRAV1-2A0A0B4J238 106 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 A0A0G2JK05 382 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 A1L4Q6 167 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 ZNF850A8MQ14 1090 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 SHISA9B4DS77 424 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 RAF1P04049 648 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 CD3EP07766 207 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 SLC2A2P11168 524 aaPredicted RBP8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 LOXP28300 417 aaPredicted RBP8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 DDOSTP39656 456 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 MTNR1BP49286 362 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 HNRNPA0Q13151 305 aaKnown RBP8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 ZNF718Q3SXZ3 478 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 C1QTNF12Q5T7M4 302 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 RGS7BPQ6MZT1 257 aaPredicted RBP8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 MOB3CQ70IA8 216 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 OR1M1Q8NGA1 313 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 OR52N4Q8NGI2 321 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 OR5D14Q8NGL3 314 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 TRMT10AQ8TBZ6 339 aaKnown RBP8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 TMEM171Q8WVE6 324 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 PHYHIPQ92561 330 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 GTF3AQ92664 365 aaKnown RBP8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 PIGTQ969N2 578 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 HAVCR1Q96D42 359 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 SYT3Q9BQG1 590 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 ZCCHC4Q9H5U6 513 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 CGGBP1Q9UFW8 167 aaPredicted RBP8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 ZNF391Q9UJN7 358 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 POU2F3Q9UKI9 436 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 SPEF1Q9Y4P9 236 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 PMF1-BGLAPU3KQ54 211 aa8.34□□□□□ -1.07
SNRNP40-201ENST00000263694 TENM4Q6N022 2769 aa8.34□□□□□ -1.08
SNRNP40-201ENST00000263694 A0A0B4J203 849 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 E7EQL1 145 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 H0YL77 283 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 J3QKU1 62 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 J3QW42 95 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 GMDSO60547 372 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 NRASP01111 189 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 IL1AP01583 271 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 RAC2P15153 192 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF12P17014 697 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 FSTP19883 344 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 RAB3BP20337 219 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 CA6P23280 308 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 CFL1P23528 166 aaKnown RBP8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 GCH1P30793 250 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 GLRXP35754 106 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 PRDX4Q13162 271 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 BEX5Q5H9J7 111 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 MEX3BQ6ZN04 569 aaKnown RBP8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 SSX8Q7RTT4 187 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 LILRB1Q8NHL6 650 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 SYNPRQ8TBG9 265 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 SSC4DQ8WTU2 575 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 PAPOLGQ9BWT3 736 aaKnown RBP8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 MRPL37Q9BZE1 423 aaKnown RBP8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 FGF23Q9GZV9 251 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 CKLFQ9UBR5 152 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 PURGQ9UJV8 347 aaKnown RBP8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 FOXJ3Q9UPW0 622 aa8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 HRNRQ86YZ3 2850 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-201ENST00000263694 COL12A1Q99715 3063 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 HELZ2Q9BYK8 2649 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 IGHV3-64DA0A0J9YX35 117 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF816-ZNF321PA0A0X1KG74 233 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 ANXA2P2A6NMY6 339 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 PRSS44E7EML9 344 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 SULT1B1O43704 296 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 CLDN1O95832 211 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF250P15622 560 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 IGFBP2P18065 325 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 ATF1P18846 271 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 RAB3AP20336 220 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 RBMXP38159 391 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 CLDN12P56749 244 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 ADIPOQQ15848 244 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 CLVS2Q5SYC1 327 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 HES5Q5TA89 166 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 MBNL2Q5VZF2 373 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms