RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 LHFPL2Q6ZUX7 228 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 CALHM3Q86XJ0 350 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 ANGPTL6Q8NI99 470 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 RTL8AQ9BWD3 113 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 S1PR5Q9H228 398 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 MMACHCQ9Y4U1 282 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 CLEC18AA5D8T8 446 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 RAB32Q13637 225 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 PMS2P11Q13670 270 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 TMEM229BQ8NBD8 167 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 CLEC18CQ8NCF0 446 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 ST6GAL2Q96JF0 529 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 PLEKHA2Q9HB19 425 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 B9D1Q9UPM9 204 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 ITGB4P16144 1822 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 LOC102723971A0A1B0GUV8 181 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 EIF4E2O60573 245 aaKnown RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 OLFM2O95897 454 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 EN2P19622 333 aaPredicted RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 ZMAT5Q9UDW3 170 aaKnown RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 MYO9BQ13459 2157 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 XKRY2A2RUG3 117 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 INSM1Q01101 510 aaPredicted RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 HMGCLL1Q8TB92 370 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 HGDQ93099 445 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 ARHGAP5-AS1Q96IT6 56 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 B3GAT1Q9P2W7 334 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 DEFB108AA8MXU0 73 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 USF1P22415 310 aaPredicted RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 CD96P40200 585 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 GALR1P47211 349 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 CYB561P49447 251 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 THEM4Q5T1C6 240 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 CDC20BQ86Y33 519 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 VN1R1Q9GZP7 353 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 DBX1A6NMT0 343 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 NDUFB6O95139 128 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 OPN1MWP04001 364 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 OPN1MW2P0DN77 364 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 OPN1MW3P0DN78 364 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 ELAVL1Q15717 326 aaKnown RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 ETFDHQ16134 617 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 TIGITQ495A1 244 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 TRAV1-2A0A0B4J238 106 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 K7EQM0 130 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 GYPAP02724 150 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 POU3F3P20264 500 aaPredicted RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 GFERP55789 205 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 DHRS2Q13268 280 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 TOMM34Q15785 309 aaPredicted RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 WDR38Q5JTN6 314 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 RNASEKQ6P5S7 137 aaKnown RBP10.86□□□□□ -0.67
SMG6-201ENST00000263073 NUBPLQ8TB37 319 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 CCDC74AQ96AQ1 378 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 MMP26Q9NRE1 261 aa10.86□□□□□ -0.67
SMG6-201ENST00000263073 SH2D1BO14796 132 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 CER1O95813 267 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 CHRNA7P36544 502 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 HIST1H3AP68431 136 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 OR10X1Q8NGY0 326 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 ACY3Q96HD9 319 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 ADGRG7Q96K78 797 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 ABHD1Q96SE0 405 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 COL22A1Q8NFW1 1626 aaPredicted RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 NHSQ6T4R5 1651 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 NKX6-3A6NJ46 265 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 KIAA1324LA8MWY0 1029 aaPredicted RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 ZNF205O95201 554 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 HOXB3P14651 431 aaPredicted RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 HSD17B7P56937 341 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 MRPS21P82921 87 aaKnown RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 FOXF1Q12946 379 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 OR5I1Q13606 314 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 ZNF485Q8NCK3 441 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 PLAC1Q9HBJ0 212 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 FBXO34Q9NWN3 711 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 MYO5AQ9Y4I1 1855 aaKnown RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 CXCL13O43927 109 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 IGLV3-25P01717 112 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 IGHV3-13P01766 116 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 IGHV3-7P01780 117 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 PRDX4Q13162 271 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 ZNF77Q15935 545 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 TMEM128Q5BJH2 165 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 EMC4Q5J8M3 183 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 ADAT1Q9BUB4 502 aaKnown RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 LAT2Q9GZY6 243 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 KCND3Q9UK17 655 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 TIMM10BQ9Y5J6 103 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 BMPR1BO00238 502 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 ADAM20O43506 726 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 TPPP2P59282 170 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 SRSF5Q13243 272 aaKnown RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 ABI3BPQ7Z7G0 1075 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 BAHD1Q8TBE0 780 aaPredicted RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 ALKBH3Q96Q83 286 aaPredicted RBP10.85□□□□□ -0.67
SMG6-201ENST00000263073 TXNIPQ9H3M7 391 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 TRAPPC4Q9Y296 219 aa10.85□□□□□ -0.67
SMG6-201ENST00000263073 BTBD17A6NE02 478 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms