RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CELF2-AS1Q8N7Q2 184 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 C19orf18Q8NEA5 215 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 CSNK2A3Q8NEV1 391 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 OR8S1Q8NH09 359 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 PIGCQ92535 297 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 GNG8Q9UK08 70 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 KCNS2Q9ULS6 477 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 EXOGQ9Y2C4 368 aaKnown RBP10.66□□□□□ -0.7
LSM5-201ENST00000223084 JMJD1CQ15652 2540 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.65□□□□□ -0.7
LSM5-201ENST00000223084 DAPL1A0PJW8 107 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 A6NLC8 198 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 SNTNA6NMZ2 147 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 B4DSR2 109 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 H3BSH0 61 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 J3QRE1 110 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 IFNL4K9M1U5 179 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 P2RY10O00398 339 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 MPZL2O60487 215 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 CRLF1O75462 422 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 WBP4O75554 376 aaKnown RBP10.65□□□□□ -0.7
LSM5-201ENST00000223084 SULT1C4O75897 302 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 IGLV3-1P01715 115 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 GNALP38405 381 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 PRDX4Q13162 271 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 SMN1Q16637 294 aaKnown RBP10.65□□□□□ -0.7
LSM5-201ENST00000223084 ZNF181Q2M3W8 571 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 DMRTC1Q5HYR2 192 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 ZNF691Q5VV52 312 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 WDR86Q86TI4 376 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 KLBQ86Z14 1044 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 ELMOD2Q8IZ81 293 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 DHRSXQ8N5I4 330 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 BOLLQ8N9W6 283 aaKnown RBP10.65□□□□□ -0.7
LSM5-201ENST00000223084 SPERTQ8NA61 448 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 OR11L1Q8NGX0 322 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 CNIH3Q8TBE1 160 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 Q8TCH9 128 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 RORBQ92753 470 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
LSM5-201ENST00000223084 RAB39BQ96DA2 213 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 FGF23Q9GZV9 251 aaPredicted RBP10.65□□□□□ -0.7
LSM5-201ENST00000223084 DCLRE1BQ9H816 532 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 FN3KRPQ9HA64 309 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 ACOXLQ9NUZ1 547 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 C1orf123Q9NWV4 160 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 ZNF391Q9UJN7 358 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 PCDHB10Q9UN67 800 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 MYRFQ9Y2G1 1151 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 SNX5Q9Y5X3 404 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 DNHD1Q96M86 4753 aa10.65□□□□□ -0.7
LSM5-201ENST00000223084 DOCK11Q5JSL3 2073 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 A0A1B0GTI1 187 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 LRRC30A6NM36 301 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 PLPP2O43688 288 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 PTBP3O95758 552 aaKnown RBP10.64□□□□□ -0.71
LSM5-201ENST00000223084 CST4P01036 141 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 MSMBP08118 114 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 IRF2P14316 349 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 FAHP16930 419 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 MDH2P40926 338 aaKnown RBP10.64□□□□□ -0.71
LSM5-201ENST00000223084 MAP2K3P46734 347 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 OR12D2P58182 307 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 ISL1P61371 349 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 CSNK2BP67870 215 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 ADARB1P78563 741 aaKnown RBP10.64□□□□□ -0.71
LSM5-201ENST00000223084 LHFPL3Q86UP9 236 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 CATSPERDQ86XM0 798 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 C11orf53Q8IXP5 236 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 ACBD7Q8N6N7 88 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 DEFB108BQ8NET1 73 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 SEMA6DQ8NFY4 1073 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 OR1M1Q8NGA1 313 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 ERGIC1Q969X5 290 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 Q96MT0 163 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 METTL17Q9H7H0 456 aaPredicted RBP10.64□□□□□ -0.71
LSM5-201ENST00000223084 MOB1AQ9H8S9 216 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 TMEM165Q9HC07 324 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 C8orf4Q9NR00 106 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 C14orf119Q9NWQ9 140 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 PIGLQ9Y2B2 252 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 MPC1Q9Y5U8 109 aa10.64□□□□□ -0.71
LSM5-201ENST00000223084 PPIAL4EA0A075B759 164 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 ZNF816-ZNF321PA0A0X1KG74 233 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 hCG_1807616A0A1W2PRN6 198 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 A6NIN4 97 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 ANXA2P2A6NMY6 339 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 PPIAL4DF5H284 164 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 DHRS3O75911 302 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 PPIAL4FP0DN26 164 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 CD80P33681 288 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 THBS2P35442 1172 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 KIR3DL2P43630 455 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 DVL1P1P54792 670 aaPredicted RBP10.63□□□□□ -0.71
LSM5-201ENST00000223084 SEC61A1P61619 476 aaKnown RBP10.63□□□□□ -0.71
LSM5-201ENST00000223084 ACTC1P68032 377 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 ACTA1P68133 377 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 LCN2P80188 198 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms