RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 LOC101059948A0A1B0GTJ6 334 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 OR5H14A6NHG9 310 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 TOR1AO14656 332 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 XRCC3O43542 346 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 CTAG2O75638 210 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 GLSO94925 669 aaPredicted RBP10.71□□□□□ -0.69
CHPF2-201ENST00000035307 PET100P0DJ07 73 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 PPP3CBP16298 524 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 MSR1P21757 451 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHPF2-201ENST00000035307 ZNF695Q8IW36 515 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 CPT1CQ8TCG5 803 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 PIGQQ9BRB3 760 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 EVA1AQ9H8M9 152 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 PTPN13Q12923 2485 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.71□□□□□ -0.692e-9■■□□□ 14.3
CHPF2-201ENST00000035307 PLPP3O14495 311 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 HS3ST1O14792 307 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 MED6O75586 246 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 WISP1O95388 367 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 PPT1P50897 306 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 PPP1R1CQ8WVI7 109 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 ST8SIA1Q92185 356 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 METTL9Q9H1A3 318 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 ESRP2Q9H6T0 727 aaKnown RBP10.71□□□□□ -0.69
CHPF2-201ENST00000035307 CRLF2Q9HC73 371 aa10.71□□□□□ -0.69
CHPF2-201ENST00000035307 A0A1W2PP11 408 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 SIGLEC5O15389 551 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 RAMP1O60894 148 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 PNPP00491 289 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 ADH6P28332 368 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 RPS4XP62701 263 aaKnown RBP10.71□□□□□ -0.7
CHPF2-201ENST00000035307 DYRK1AQ13627 763 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 COL19A1Q14993 1142 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 TIGD3Q6B0B8 471 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 NR2C2APQ86WQ0 139 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 STK35Q8TDR2 534 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 PLPPR2Q96GM1 343 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 MAP6Q96JE9 813 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 CNTD2Q9H8S5 307 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 CDH20Q9HBT6 801 aa10.71□□□□□ -0.7
CHPF2-201ENST00000035307 A0A0G2JMM0 328 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 A0A1W2PPB8 328 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 A0A1W2PRS3 328 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 SMCO3A2RU48 225 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 KIR3DP1A8MWS1 328 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 XRCC2O43543 280 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 SULT1B1O43704 296 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 CD53P19397 219 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 EIF1P41567 113 aaKnown RBP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 TRA2AQ13595 282 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 CEACAM16Q2WEN9 425 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 RFPL4BQ6ZWI9 263 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 ZCCHC4Q9H5U6 513 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 CSAG2Q9Y5P2 127 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 BORCS7-ASMTA0A0B4J1R7 106 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 TOX3O15405 576 aaPredicted RBP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 TSPAN15O95858 294 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 IGKV3-11P04433 115 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 PRKACBP22694 351 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 PTBP1P26599 531 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 OR3A4PP47883 348 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 GABRA4P48169 554 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 ASCL1P50553 236 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 OR51H1Q8NH63 302 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 ABHD3Q8WU67 409 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 RBPMSQ93062 196 aaKnown RBP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 ZC3H10Q96K80 434 aaKnown RBP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF416Q9BWM5 594 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 NXF2Q9GZY0 626 aaKnown RBP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 FAM234AQ9H0X4 552 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 DOPEY2Q9Y3R5 2298 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 OR6C76A6NM76 312 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 PIN1P1O15428 100 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 PHF1O43189 567 aaPredicted RBP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 CPT2P23786 658 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 APLNRP35414 380 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 ATP1B3P54709 279 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 TOR2AQ5JU69 321 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 DCAF10Q5QP82 559 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 MKXQ8IYA7 352 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 RNF128Q8TEB7 428 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 NINJ1Q92982 152 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 ARHGAP5-AS1Q96IT6 56 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 PGLYRP3Q96LB9 341 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF2Q9BSG1 426 aaPredicted RBP10.7□□□□□ -0.7
CHPF2-201ENST00000035307 DLL4Q9NR61 685 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 TAS2R5Q9NYW4 299 aa10.7□□□□□ -0.7
CHPF2-201ENST00000035307 PLXNA2O75051 1894 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 OGG1O15527 345 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 DHHO43323 396 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SERPINE2P07093 398 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ACSM4P0C7M7 580 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 CBR1P16152 277 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 CD96P40200 585 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF169Q14929 603 aaPredicted RBP10.69□□□□□ -0.7
CHPF2-201ENST00000035307 TEX261Q6UWH6 196 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 TCTE3Q8IZS6 198 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SLC26A10Q8NG04 563 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 GLYATL2Q8WU03 294 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms