RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Nubp2Q9R061 275 aa10.54□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Tpk1Q9R0M5 243 aa10.54□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Cib1Q9Z0F4 191 aa10.54□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Dnajc13D4AFX7 2248 aaKnown RBP10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 IghdA0A0A6YW14 291 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Ighv3-4A0A0A6YXF1 117 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Prdm13E9PZZ1 754 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Olfr288E9Q1P2 318 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Olfr623E9Q382 317 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 P01725 110 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Gnao1P18872 354 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 AcheP21836 614 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Hsd3b2P26149 373 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Ranbp1P34022 203 aaKnown RBP10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 GifP52787 417 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Efnb1P52795 345 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Pdss2Q33DR3 401 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Patl1Q3TC46 770 aaKnown RBP10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 6430531B16RikQ3V2J1 307 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 RasefQ5RI75 627 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Ei24Q61070 340 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Rnf220Q6PDX6 566 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Zfp429Q7M6Y0 485 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Olfr782Q7TRI2 314 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Tnfsfm13Q8BXS2 410 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Rad51ap1Q8C551 337 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 BicralQ8CHH5 1074 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Q8R1Y2 203 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 MavsQ8VCF0 503 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Olfr1453Q8VFX0 307 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Olfr1447Q8VFX3 309 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Olfr646Q8VGW2 312 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Fyttd1Q91Z49 317 aaKnown RBP10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 GatbQ99JT1 557 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Tspan31Q9CQ88 210 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Exosc5Q9CRA8 235 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Vmn1r56Q9EPS9 310 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Chst1Q9EQC0 411 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Ninj2Q9JL89 143 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 Rgs6Q9Z2H2 472 aa10.53□□□□□ -0.72
Ccdc28a-203ENSMUST00000173243 9530053A07RikE9PVG8 2581 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Mageb4A2A9R3 556 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Ccdc74aE9Q9U8 364 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Olfr292F8VQ84 308 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Lbhd2G3UW55 114 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Gm20481G3UXK4 153 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Hmox2O70252 315 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Igh-VJ558P01758 117 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 PlatP11214 559 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Evx1P23683 416 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Ccl11P48298 97 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Mesp1P97309 243 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Folr2Q05685 251 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Nufip2Q5F2E7 692 aaKnown RBP10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Pou4f3Q63955 338 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Pan3Q640Q5 837 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Slc25a23Q6GQS1 467 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Znf250Q7TNU6 535 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Zfp747Q8BHM7 422 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Unc119bQ8C4B4 251 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Olfr483Q8VG05 315 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Cisd1Q91WS0 108 aaKnown RBP10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Fdx2Q9CPW2 174 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Gdpd1Q9CRY7 314 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Trim13Q9CYB0 407 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 PacrglQ9D3X5 248 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Nrip3Q9JJR9 240 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Reep6Q9JM62 201 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Slc7a8Q9QXW9 531 aa10.52□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Igkv4-80A0A075B5L7 116 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Olfr1123A2AT85 323 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Olfr1215A3KGY3 312 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Proca1B0QZF7 307 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Zfp81B8JJZ7 531 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Gm4175D3YTW8 314 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Gm15737D3YZR0 106 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Gm8871F7AXK2 190 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Vmn1r16K7N775 303 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Atpif1O35143 106 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Kcns1O35173 497 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Pdlim3O70209 316 aaKnown RBP10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Agr2O88312 175 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Cst3P21460 140 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Wnt5aP22725 380 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Gpm6aP35802 278 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Foxk1P42128 719 aaKnown RBP10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Cdc42P60766 191 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Snrpd2P62317 118 aaKnown RBP10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Il18P70380 192 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Znf575Q3TXZ1 239 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Zfp729aQ4QQP3 973 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 HlxQ61670 476 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 AgerQ62151 402 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Rrm2bQ6PEE3 351 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Myl12aQ6ZWQ9 172 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Olfr859Q7TRF5 309 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 NanogQ80Z64 305 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Galnt12Q8BGT9 576 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Rgs7bpQ8BQP9 257 aa10.51□□□□□ -0.73
Ccdc28a-203ENSMUST00000173243 Exosc6Q8BTW3 273 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms