RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Rnf166Q3U9F6 237 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Foxr2Q3UM89 302 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr1229Q7TQZ9 311 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr871Q7TRF0 311 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr479Q7TRV1 327 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tmem108Q8BHE4 574 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Rrnad1Q8BZG5 475 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Neil1Q8K4Q6 389 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Vmn1r226Q8R2A8 298 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Wdr74Q8VCG3 384 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gtf3aQ8VHT7 364 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Asb8Q91ZT9 288 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 PsphQ99LS3 225 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tex12Q9CR81 123 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Rhebl1Q9D8T3 184 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Fbp1Q9QXD6 338 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 PthQ9Z0L6 115 aa6.88□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ice1E9Q286 2241 aaKnown RBP6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr1532-ps1A0A0R4J8U2 307 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Mettl23A2AA28 253 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tmem200bD3Z0P8 284 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Enpp7D3Z6V6 446 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm9972E9Q053 102 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Vmn1r176G3UW31 304 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Prr23a1G3UW32 258 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr707K7N662 307 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr738L7N1X7 311 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cbr1P48758 277 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Dbx1P52950 335 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Csrp1P97315 193 aaKnown RBP6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Vmn1r236Q05A06 334 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gp49aQ61450 303 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Epha6Q62413 1035 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 D11Wsu47eQ6PIX9 558 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 LmlnQ8BMN4 681 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gas2l1Q8JZP9 678 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 SarafQ8R3Q0 334 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 FktnQ8R507 461 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr1143Q8VEU8 314 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr558Q8VGZ7 317 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Xrcc2Q9CX47 278 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 1700013G24RikQ9DAC6 286 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Nek7Q9ES74 302 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Elovl1Q9JLJ5 279 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Scn5aQ9JJV9 2019 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr576A0A0G2JFH3 312 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm16368A0A1Y7VNG9 144 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 C1ql1O88992 258 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hmgb2P30681 210 aaKnown RBP6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 BglapP86546 95 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Bglap2P86547 95 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 F13bQ07968 669 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Cass4Q08EC4 804 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Vmn1r223Q5SSA0 361 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Mtcp1Q60945 107 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Mapk3Q63844 380 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Onecut2Q6XBJ3 505 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 BC049730Q810N3 246 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Acsm5Q8BGA8 578 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 PstkQ8BP74 359 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Fbxl8Q8CIG9 374 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 BmperQ8CJ69 685 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ccm2Q8K2Y9 453 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 AfmidQ8K4H1 305 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Mitd1Q8VDV8 249 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr849Q8VFF6 312 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Camk1gQ91VB2 477 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 QprtQ91X91 299 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ubqln4Q99NB8 596 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Serpinb7Q9D695 380 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gabra4Q9D6F4 552 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Trp53tg5Q9D976 238 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Slc22a17Q9D9E0 401 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Zfp869Q9DC47 529 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tmprss2Q9JIQ8 490 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Angpt4Q9WVH6 509 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Phf1Q9Z1B8 559 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Kcnj16Q9Z307 419 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tnrc6aQ3UHK8 1896 aaKnown RBP6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm3854A0A1B0GSS6 495 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr1158A2BHP7 313 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm17728E9Q5K2 132 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gm8677K9J7G9 307 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 PtgdsO09114 189 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ntn1O09118 604 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Csnk2a2O54833 350 aaKnown RBP6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Mtnd4lP03903 98 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Tdpoz1P0DMR5 365 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Irf2P23906 349 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Gng8P63078 70 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Hhipl1Q14DK5 791 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Defb23Q30KP0 166 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 C1ql4Q4ZJM9 238 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Ceacam10Q61400 265 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 ZpbpQ62522 350 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr1500Q7TQQ3 311 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Olfr787Q7TRI1 312 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Mrps10Q80ZK0 160 aaKnown RBP6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Eri3Q8C460 337 aa6.87□□□□□ -1.31
Bdnf-209ENSMUST00000111050 Uqcc3Q8K2T4 89 aa6.87□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 86.3 ms