RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W SNU71P53207 620 aaKnown RBP2.12□□□□□ -2.07
SGF11YPL047W YGR151CP53287 111 aa2.12□□□□□ -2.07
SGF11YPL047W DIA2Q08496 732 aaPredicted RBP2.12□□□□□ -2.07
SGF11YPL047W RNR1P21524 888 aaKnown RBP2.11□□□□□ -2.07
SGF11YPL047W APN1P22936 367 aa2.11□□□□□ -2.07
SGF11YPL047W PEX1P24004 1043 aa2.11□□□□□ -2.07
SGF11YPL047W BET3P36149 193 aa2.11□□□□□ -2.07
SGF11YPL047W MIP6P38760 659 aaKnown RBP2.11□□□□□ -2.07
SGF11YPL047W PMC1P38929 1173 aaPredicted RBP2.11□□□□□ -2.07
SGF11YPL047W BPL1P48445 690 aaPredicted RBP2.11□□□□□ -2.07
SGF11YPL047W YDR338CQ05497 695 aa2.11□□□□□ -2.07
SGF11YPL047W RGC1Q06108 1083 aaKnown RBP2.11□□□□□ -2.07
SGF11YPL047W FLC1Q08967 793 aa2.11□□□□□ -2.07
SGF11YPL047W YMC1P32331 307 aa2.1□□□□□ -2.07
SGF11YPL047W YMC2P38087 329 aa2.1□□□□□ -2.07
SGF11YPL047W KSP1P38691 1029 aaKnown RBP2.1□□□□□ -2.07
SGF11YPL047W RPN10P38886 268 aaKnown RBP2.1□□□□□ -2.07
SGF11YPL047W GET2P40056 285 aa2.1□□□□□ -2.07
SGF11YPL047W PIG2P40187 538 aa2.1□□□□□ -2.07
SGF11YPL047W TAX4P47030 604 aa2.1□□□□□ -2.07
SGF11YPL047W BNA2P47125 453 aa2.1□□□□□ -2.07
SGF11YPL047W NPY1P53164 384 aa2.1□□□□□ -2.07
SGF11YPL047W COX18P53239 316 aa2.1□□□□□ -2.07
SGF11YPL047W PRP28P23394 588 aa2.09□□□□□ -2.07
SGF11YPL047W APL3P38065 1025 aa2.09□□□□□ -2.07
SGF11YPL047W TY4A-JP47023 414 aa2.09□□□□□ -2.07
SGF11YPL047W ASN1P49089 572 aaKnown RBP2.09□□□□□ -2.07
SGF11YPL047W STP1Q00947 519 aa2.09□□□□□ -2.07
SGF11YPL047W TDA9Q04545 1251 aa2.09□□□□□ -2.07
SGF11YPL047W YDL086WQ07505 273 aa2.09□□□□□ -2.07
SGF11YPL047W BMS1Q08965 1183 aaKnown RBP2.09□□□□□ -2.07
SGF11YPL047W ULA1Q12059 462 aa2.09□□□□□ -2.07
SGF11YPL047W MDM20Q12387 796 aaKnown RBP2.09□□□□□ -2.07
SGF11YPL047W Q0142Q9ZZW4 58 aa2.09□□□□□ -2.07
SGF11YPL047W PHO5P00635 467 aa2.08□□□□□ -2.08
SGF11YPL047W CAN1P04817 590 aa2.08□□□□□ -2.08
SGF11YPL047W BCS1P32839 456 aa2.08□□□□□ -2.08
SGF11YPL047W BIT2P38346 545 aa2.08□□□□□ -2.08
SGF11YPL047W YHR020WP38708 688 aaKnown RBP2.08□□□□□ -2.08
SGF11YPL047W YHR097CP38809 366 aaKnown RBP2.08□□□□□ -2.08
SGF11YPL047W NOP9P47077 666 aaKnown RBP2.08□□□□□ -2.08
SGF11YPL047W RTA1P53047 317 aa2.08□□□□□ -2.08
SGF11YPL047W NMA2P53204 395 aa2.08□□□□□ -2.08
SGF11YPL047W HMO1Q03973 246 aaKnown RBP2.08□□□□□ -2.08
SGF11YPL047W CHS5Q12114 671 aaKnown RBP2.08□□□□□ -2.08
SGF11YPL047W ECM3Q99252 613 aa2.08□□□□□ -2.08
SGF11YPL047W LAM4P38800 1345 aa2.08□□□□□ -2.08
SGF11YPL047W RAD18P10862 487 aa2.07□□□□□ -2.08
SGF11YPL047W GAL11P19659 1081 aa2.07□□□□□ -2.08
SGF11YPL047W RGT1P32862 1170 aa2.07□□□□□ -2.08
SGF11YPL047W MCD4P36051 919 aa2.07□□□□□ -2.08
SGF11YPL047W HOT13P36078 116 aa2.07□□□□□ -2.08
SGF11YPL047W RSP5P39940 809 aaKnown RBP2.07□□□□□ -2.08
SGF11YPL047W MIT1P40002 666 aa2.07□□□□□ -2.08
SGF11YPL047W CCT5P40413 562 aaKnown RBP2.07□□□□□ -2.08
SGF11YPL047W ULP2P40537 1034 aaPredicted RBP2.07□□□□□ -2.08
SGF11YPL047W PSA1P41940 361 aaKnown RBP2.07□□□□□ -2.08
SGF11YPL047W MEP2P41948 499 aa2.07□□□□□ -2.08
SGF11YPL047W PMT6P42934 759 aa2.07□□□□□ -2.08
SGF11YPL047W RSC8P43609 557 aaKnown RBP2.07□□□□□ -2.08
SGF11YPL047W ATG36P46983 293 aa2.07□□□□□ -2.08
SGF11YPL047W HFD1Q04458 532 aa2.07□□□□□ -2.08
SGF11YPL047W RPN7Q06103 429 aaKnown RBP2.07□□□□□ -2.08
SGF11YPL047W ORM2Q06144 216 aa2.07□□□□□ -2.08
SGF11YPL047W THI22Q06490 572 aa2.07□□□□□ -2.08
SGF11YPL047W CIR2Q08822 631 aa2.07□□□□□ -2.08
SGF11YPL047W TPK2P06245 380 aa2.06□□□□□ -2.08
SGF11YPL047W NTH1P32356 751 aa2.06□□□□□ -2.08
SGF11YPL047W STO1P34160 861 aaKnown RBP2.06□□□□□ -2.08
SGF11YPL047W MTC2P34246 357 aa2.06□□□□□ -2.08
SGF11YPL047W CTP1P38152 299 aa2.06□□□□□ -2.08
SGF11YPL047W YNL195CP40168 261 aa2.06□□□□□ -2.08
SGF11YPL047W GID8P40208 455 aa2.06□□□□□ -2.08
SGF11YPL047W YJL049WP47048 450 aa2.06□□□□□ -2.08
SGF11YPL047W MPS3P47069 682 aa2.06□□□□□ -2.08
SGF11YPL047W HUL5P53119 910 aa2.06□□□□□ -2.08
SGF11YPL047W YPL068CQ02749 293 aa2.06□□□□□ -2.08
SGF11YPL047W NGL2Q03264 515 aaKnown RBP2.06□□□□□ -2.08
SGF11YPL047W YSH1Q06224 779 aaPredicted RBP2.06□□□□□ -2.08
SGF11YPL047W SEC15P22224 910 aa2.05□□□□□ -2.08
SGF11YPL047W MBR1P23493 339 aa2.05□□□□□ -2.08
SGF11YPL047W VBA3P25594 458 aa2.05□□□□□ -2.08
SGF11YPL047W YKR018CP36114 725 aa2.05□□□□□ -2.08
SGF11YPL047W YKR051WP36142 418 aa2.05□□□□□ -2.08
SGF11YPL047W HSL7P38274 827 aa2.05□□□□□ -2.08
SGF11YPL047W KHA1P40309 873 aa2.05□□□□□ -2.08
SGF11YPL047W PCL10P53124 433 aa2.05□□□□□ -2.08
SGF11YPL047W DIP5P53388 608 aa2.05□□□□□ -2.08
SGF11YPL047W YDR179W-AQ03983 463 aa2.05□□□□□ -2.08
SGF11YPL047W IRC3Q06683 689 aa2.05□□□□□ -2.08
SGF11YPL047W VPS36Q06696 566 aa2.05□□□□□ -2.08
SGF11YPL047W GEP3Q08622 556 aa2.05□□□□□ -2.08
SGF11YPL047W AI5_ALPHAQ9ZZX1 630 aa2.05□□□□□ -2.08
SGF11YPL047W CIT2P08679 460 aa2.04□□□□□ -2.08
SGF11YPL047W FEN2P25621 512 aaKnown RBP2.04□□□□□ -2.08
SGF11YPL047W PAM1P37304 830 aaKnown RBP2.04□□□□□ -2.08
SGF11YPL047W APN2P38207 520 aa2.04□□□□□ -2.08
SGF11YPL047W GDH3P39708 457 aa2.04□□□□□ -2.08
SGF11YPL047W CAF16P43569 289 aa2.04□□□□□ -2.08
SGF11YPL047W RFX1P48743 811 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms