RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	MLH2	Q07980	695 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	RAD9	P14737	1309 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	INO1	P11986	533 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	CAD1	P24813	409 aa	Known RBP	4.23	□□□□□ -1.73
SNF2	YOR290C	ITR2	P30606	609 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	MCX1	P38323	520 aa	Predicted RBP	4.23	□□□□□ -1.73
SNF2	YOR290C	HSE1	P38753	452 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	RAD55	P38953	406 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	AIP1	P46680	615 aa	Known RBP	4.23	□□□□□ -1.73
SNF2	YOR290C	KEL2	P50090	882 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	CPR8	P53728	308 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	HEH2	Q03281	663 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	YLR031W	Q07978	186 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	WIP1	Q2V2P8	89 aa		4.23	□□□□□ -1.73
SNF2	YOR290C	LTE1	P07866	1435 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	SEC63	P14906	663 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	RPL8A	P17076	256 aa	Known RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	PMT2	P31382	759 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	SWI3	P32591	825 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	FAR3	P46671	204 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	SRB7	P47822	140 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	RVB1	Q03940	463 aa	Known RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	YDL129W	Q07555	291 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	FAP7	Q12055	197 aa	Predicted RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	RRP36	Q12481	300 aa	Predicted RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	DPB2	P24482	689 aa	Predicted RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	MEF1	P25039	761 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	ANP1	P32629	500 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	EFM3	P47163	339 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	PLP1	Q04004	230 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	SYF1	Q04048	859 aa	Predicted RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	TRS33	Q99394	268 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	STE4	P18851	423 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	OLE1	P21147	510 aa	Known RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	PRO1	P32264	428 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	STN1	P38960	494 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	FRT2	P39734	528 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	STR2	P47164	639 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	GCV1	P48015	400 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	DUS4	Q06063	367 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	TRE1	Q08919	783 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	PGC1	Q08959	321 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	MSB1	P21339	1137 aa	Known RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	KRE2	P27809	442 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	MKS1	P34072	584 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	RPS20	P38701	121 aa	Known RBP	4.22	□□□□□ -1.73
SNF2	YOR290C	RCY1	P39531	840 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	ALF1	P53904	254 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	IVY1	Q04934	453 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	RSA1	Q08932	381 aa		4.22	□□□□□ -1.73
SNF2	YOR290C	PDR1	P12383	1068 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	NGG1	P32494	702 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	VAM7	P32912	316 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	BUD2	P33314	1104 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	DRE2	P36152	348 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	CTM1	P38818	585 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	FYV10	P40492	516 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	YNR063W	P53749	607 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	FOL1	P53848	824 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	IMP4	P53941	290 aa	Known RBP	4.21	□□□□□ -1.73
SNF2	YOR290C	MUK1	Q02866	612 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	SHE9	Q04172	456 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	VPS20	Q04272	221 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	CUR1	Q06469	252 aa		4.21	□□□□□ -1.73
SNF2	YOR290C	CIT1	P00890	479 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	ADE3	P07245	946 aa	Known RBP	4.21	□□□□□ -1.74
SNF2	YOR290C	KIN1	P13185	1064 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	RSC6	P25632	483 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	NAM7	P30771	971 aa	Known RBP	4.21	□□□□□ -1.74
SNF2	YOR290C	APM2	P38700	605 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	PTP3	P40048	928 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	ILM1	P47155	203 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	ECM38	Q05902	660 aa	Predicted RBP	4.21	□□□□□ -1.74
SNF2	YOR290C	GIC2	Q06648	383 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	CLB4	P24871	460 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	CTR86	P25355	563 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	BIT2	P38346	545 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	OSH7	P38755	437 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	PEX18	P38855	283 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	PES4	P39684	611 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	FAF1	P40546	346 aa	Predicted RBP	4.21	□□□□□ -1.74
SNF2	YOR290C	HXT8	P40886	569 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	MSB3	P48566	633 aa	Predicted RBP	4.21	□□□□□ -1.74
SNF2	YOR290C	HXT15	P54854	567 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	TIM11	P81449	96 aa	Predicted RBP	4.21	□□□□□ -1.74
SNF2	YOR290C	YMR102C	Q03177	834 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	TAP42	Q04372	366 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	MMR1	Q06324	491 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	SPE2	P21182	396 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	DBF4	P32325	704 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	AKL1	P38080	1108 aa	Known RBP	4.21	□□□□□ -1.74
SNF2	YOR290C	YJL206C	P39529	758 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	COG2	P53271	262 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	YOR378W	Q08902	515 aa		4.21	□□□□□ -1.74
SNF2	YOR290C	URA3	P03962	267 aa		4.2	□□□□□ -1.74
SNF2	YOR290C	RPL19A	P0CX82	189 aa	Known RBP	4.2	□□□□□ -1.74
SNF2	YOR290C	RPL19B	P0CX83	189 aa	Predicted RBP	4.2	□□□□□ -1.74
SNF2	YOR290C	RAD4	P14736	754 aa		4.2	□□□□□ -1.74
SNF2	YOR290C	AAD3	P25612	363 aa		4.2	□□□□□ -1.74
SNF2	YOR290C	CIN8	P27895	1000 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms