RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W NAR1P23503 491 aaKnown RBP6.64□□□□□ -1.35
CAF40YNL288W NTA1P40354 457 aa6.64□□□□□ -1.35
CAF40YNL288W QDR1P40475 563 aa6.64□□□□□ -1.35
CAF40YNL288W RGD2P43556 714 aa6.64□□□□□ -1.35
CAF40YNL288W SAD1P43589 448 aa6.64□□□□□ -1.35
CAF40YNL288W TOS3P43637 560 aa6.64□□□□□ -1.35
CAF40YNL288W SPO74P45819 413 aa6.64□□□□□ -1.35
CAF40YNL288W PPT1P53043 513 aa6.64□□□□□ -1.35
CAF40YNL288W MNP1P53163 194 aaPredicted RBP6.64□□□□□ -1.35
CAF40YNL288W TPO2P53283 614 aa6.64□□□□□ -1.35
CAF40YNL288W YNL134CP53912 376 aaKnown RBP6.64□□□□□ -1.35
CAF40YNL288W MUK1Q02866 612 aa6.64□□□□□ -1.35
CAF40YNL288W SKY1Q03656 742 aa6.64□□□□□ -1.35
CAF40YNL288W COG4Q06096 861 aa6.64□□□□□ -1.35
CAF40YNL288W EMG1Q06287 252 aaKnown RBP6.64□□□□□ -1.35
CAF40YNL288W MRP10O75012 95 aa6.63□□□□□ -1.35
CAF40YNL288W SWI6P09959 803 aa6.63□□□□□ -1.35
CAF40YNL288W DAL7P21826 554 aa6.63□□□□□ -1.35
CAF40YNL288W YEL1P34225 687 aa6.63□□□□□ -1.35
CAF40YNL288W DRE2P36152 348 aa6.63□□□□□ -1.35
CAF40YNL288W ADE17P38009 592 aaKnown RBP6.63□□□□□ -1.35
CAF40YNL288W MRX3P38172 270 aa6.63□□□□□ -1.35
CAF40YNL288W MMS4P38257 691 aa6.63□□□□□ -1.35
CAF40YNL288W VID24P38263 362 aa6.63□□□□□ -1.35
CAF40YNL288W NPP2P39997 493 aa6.63□□□□□ -1.35
CAF40YNL288W SCD6P45978 349 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
CAF40YNL288W YGR237CP50089 785 aa6.63□□□□□ -1.35
CAF40YNL288W ENV11P53246 860 aa6.63□□□□□ -1.35
CAF40YNL288W DOT1Q04089 582 aaKnown RBP6.63□□□□□ -1.35
CAF40YNL288W DON1Q05610 365 aa6.63□□□□□ -1.35
CAF40YNL288W RLP24Q07915 199 aaKnown RBP6.63□□□□□ -1.35
CAF40YNL288W YPL216WQ08964 1102 aa6.63□□□□□ -1.35
CAF40YNL288W PCD1Q12524 340 aa6.63□□□□□ -1.35
CAF40YNL288W ATE1P16639 503 aa6.62□□□□□ -1.35
CAF40YNL288W GLN3P18494 730 aa6.62□□□□□ -1.35
CAF40YNL288W PSO2P30620 661 aa6.62□□□□□ -1.35
CAF40YNL288W RKM3P38222 552 aa6.62□□□□□ -1.35
CAF40YNL288W LAM5P43560 674 aa6.62□□□□□ -1.35
CAF40YNL288W AIP1P46680 615 aaKnown RBP6.62□□□□□ -1.35
CAF40YNL288W ASN1P49089 572 aaKnown RBP6.62□□□□□ -1.35
CAF40YNL288W GCV2P49095 1034 aa6.62□□□□□ -1.35
CAF40YNL288W ALT2P52892 507 aa6.62□□□□□ -1.35
CAF40YNL288W TRS130Q03660 1102 aa6.62□□□□□ -1.35
CAF40YNL288W YAP7Q08182 245 aa6.62□□□□□ -1.35
CAF40YNL288W CDC37P06101 506 aaKnown RBP6.61□□□□□ -1.35
CAF40YNL288W MUD1P32605 298 aaKnown RBP6.61□□□□□ -1.35
CAF40YNL288W RPT1P33299 467 aaKnown RBP6.61□□□□□ -1.35
CAF40YNL288W IRS4P36115 615 aaKnown RBP6.61□□□□□ -1.35
CAF40YNL288W ESL1P40456 1118 aa6.61□□□□□ -1.35
CAF40YNL288W LCB2P40970 561 aa6.61□□□□□ -1.35
CAF40YNL288W LSB3P43603 459 aaKnown RBP6.61□□□□□ -1.35
CAF40YNL288W COS5P47187 383 aa6.61□□□□□ -1.35
CAF40YNL288W ORC5P50874 479 aa6.61□□□□□ -1.35
CAF40YNL288W TIM8P57744 87 aa6.61□□□□□ -1.35
CAF40YNL288W EBS1Q03466 884 aaKnown RBP6.61□□□□□ -1.35
CAF40YNL288W MAG2Q06436 670 aaKnown RBP6.61□□□□□ -1.35
CAF40YNL288W MLH2Q07980 695 aa6.61□□□□□ -1.35
CAF40YNL288W COX4P04037 155 aa6.6□□□□□ -1.35
CAF40YNL288W CHS2P14180 963 aa6.6□□□□□ -1.35
CAF40YNL288W MSD1P15179 658 aaKnown RBP6.6□□□□□ -1.35
CAF40YNL288W MRC1P25588 1096 aa6.6□□□□□ -1.35
CAF40YNL288W TRM2P33753 639 aa6.6□□□□□ -1.35
CAF40YNL288W MRPL10P36520 322 aa6.6□□□□□ -1.35
CAF40YNL288W YHL026CP38740 315 aa6.6□□□□□ -1.35
CAF40YNL288W SKN7P38889 622 aa6.6□□□□□ -1.35
CAF40YNL288W JHD1P40034 492 aa6.6□□□□□ -1.35
CAF40YNL288W PSY2P40164 858 aa6.6□□□□□ -1.35
CAF40YNL288W TFG2P41896 400 aaPredicted RBP6.6□□□□□ -1.35
CAF40YNL288W RSC8P43609 557 aaKnown RBP6.6□□□□□ -1.35
CAF40YNL288W YGR130CP53278 816 aa6.6□□□□□ -1.35
CAF40YNL288W GIR2Q03768 265 aaPredicted RBP6.6□□□□□ -1.35
CAF40YNL288W UTP14Q04500 899 aaKnown RBP6.6□□□□□ -1.35
CAF40YNL288W SHS1Q07657 551 aa6.6□□□□□ -1.35
CAF40YNL288W YOL075CQ08234 1294 aa6.6□□□□□ -1.35
CAF40YNL288W NAT1P12945 854 aaKnown RBP6.59□□□□□ -1.35
CAF40YNL288W APL1P27351 700 aa6.59□□□□□ -1.35
CAF40YNL288W YKL023WP36103 277 aaKnown RBP6.59□□□□□ -1.35
CAF40YNL288W EFM2P38347 419 aa6.59□□□□□ -1.35
CAF40YNL288W CTM1P38818 585 aa6.59□□□□□ -1.35
CAF40YNL288W UBP5P39944 805 aa6.59□□□□□ -1.35
CAF40YNL288W HSH155P49955 971 aaKnown RBP6.59□□□□□ -1.35
CAF40YNL288W RSC1P53236 928 aa6.59□□□□□ -1.35
CAF40YNL288W AHC1Q12433 566 aa6.59□□□□□ -1.35
CAF40YNL288W ZPS1Q12512 249 aa6.59□□□□□ -1.35
CAF40YNL288W ADE4P04046 510 aaKnown RBP6.58□□□□□ -1.36
CAF40YNL288W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36 RIP-Chip
CAF40YNL288W TOM70P07213 617 aaKnown RBP6.58□□□□□ -1.36
CAF40YNL288W SSB1P11484 613 aaKnown RBP6.58□□□□□ -1.36
CAF40YNL288W YET1P35723 206 aa6.58□□□□□ -1.36
CAF40YNL288W MRPL7P36519 292 aa6.58□□□□□ -1.36
CAF40YNL288W PSY4P38193 441 aa6.58□□□□□ -1.36
CAF40YNL288W SLX1P38324 304 aa6.58□□□□□ -1.36
CAF40YNL288W BUD16P39988 312 aa6.58□□□□□ -1.36
CAF40YNL288W FTR1P40088 404 aa6.58□□□□□ -1.36
CAF40YNL288W SSB2P40150 613 aaKnown RBP6.58□□□□□ -1.36
CAF40YNL288W MCM6P53091 1017 aaKnown RBP6.58□□□□□ -1.36
CAF40YNL288W ALG11P53954 548 aaKnown RBP6.58□□□□□ -1.36
CAF40YNL288W CWC21Q03375 135 aaKnown RBP6.58□□□□□ -1.36
CAF40YNL288W WAR1Q03631 944 aa6.58□□□□□ -1.36
CAF40YNL288W LCD1Q04377 747 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms