RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	ERR2	P0CX11	437 aa		4.28	□□□□□ -1.72
RPN13	YLR421C	THR1	P17423	357 aa	Known RBP	4.28	□□□□□ -1.72
RPN13	YLR421C	ORC2	P32833	620 aa		4.28	□□□□□ -1.72
RPN13	YLR421C	NSE3	Q05541	303 aa		4.28	□□□□□ -1.72
RPN13	YLR421C	RNR1	P21524	888 aa	Known RBP	4.27	□□□□□ -1.73
RPN13	YLR421C	CRP1	P38845	465 aa	Known RBP	4.27	□□□□□ -1.73
RPN13	YLR421C	RPN10	P38886	268 aa	Known RBP	4.27	□□□□□ -1.73
RPN13	YLR421C	CHD1	P32657	1468 aa		4.26	□□□□□ -1.73
RPN13	YLR421C	HOM2	P13663	365 aa	Known RBP	4.26	□□□□□ -1.73
RPN13	YLR421C	VPS34	P22543	875 aa		4.26	□□□□□ -1.73
RPN13	YLR421C	TMT1	P32643	299 aa		4.26	□□□□□ -1.73
RPN13	YLR421C	STO1	P34160	861 aa	Known RBP	4.26	□□□□□ -1.73
RPN13	YLR421C	SET3	P36124	751 aa		4.26	□□□□□ -1.73
RPN13	YLR421C	YKR051W	P36142	418 aa		4.26	□□□□□ -1.73
RPN13	YLR421C	ATG36	P46983	293 aa		4.26	□□□□□ -1.73
RPN13	YLR421C	MAL11	P53048	616 aa		4.26	□□□□□ -1.73
RPN13	YLR421C	CDC9	P04819	755 aa		4.25	□□□□□ -1.73
RPN13	YLR421C	FUB1	P25659	250 aa		4.25	□□□□□ -1.73
RPN13	YLR421C	PAC2	P39937	518 aa		4.25	□□□□□ -1.73
RPN13	YLR421C	GLO1	P50107	326 aa		4.25	□□□□□ -1.73
RPN13	YLR421C	COX18	P53239	316 aa		4.25	□□□□□ -1.73
RPN13	YLR421C	RNH70	P53331	553 aa		4.25	□□□□□ -1.73
RPN13	YLR421C	REC102	Q02721	264 aa		4.25	□□□□□ -1.73
RPN13	YLR421C	HMO1	Q03973	246 aa	Known RBP	4.25	□□□□□ -1.73
RPN13	YLR421C	ECM3	Q99252	613 aa		4.25	□□□□□ -1.73
RPN13	YLR421C	MMS22	Q06164	1454 aa		4.24	□□□□□ -1.73
RPN13	YLR421C	CIT2	P08679	460 aa		4.24	□□□□□ -1.73
RPN13	YLR421C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RPN13	YLR421C	RRP14	P36080	434 aa	Known RBP	4.24	□□□□□ -1.73
RPN13	YLR421C	GMH1	P36125	273 aa		4.24	□□□□□ -1.73
RPN13	YLR421C	MUP3	P38734	546 aa		4.24	□□□□□ -1.73
RPN13	YLR421C	YNL195C	P40168	261 aa		4.24	□□□□□ -1.73
RPN13	YLR421C	SNP1	Q00916	300 aa	Predicted RBP	4.24	□□□□□ -1.73
RPN13	YLR421C	RPN4	Q03465	531 aa		4.24	□□□□□ -1.73
RPN13	YLR421C	RIM13	Q03792	727 aa		4.24	□□□□□ -1.73
RPN13	YLR421C	RPN7	Q06103	429 aa	Known RBP	4.24	□□□□□ -1.73
RPN13	YLR421C	OSW1	Q08692	278 aa		4.24	□□□□□ -1.73
RPN13	YLR421C	MIH1	P23748	554 aa		4.23	□□□□□ -1.73
RPN13	YLR421C	PEX1	P24004	1043 aa		4.23	□□□□□ -1.73
RPN13	YLR421C	FPR3	P38911	411 aa	Known RBP	4.23	□□□□□ -1.73
RPN13	YLR421C	BUD6	P41697	788 aa		4.23	□□□□□ -1.73
RPN13	YLR421C	CAF16	P43569	289 aa		4.23	□□□□□ -1.73
RPN13	YLR421C	NOP9	P47077	666 aa	Known RBP	4.23	□□□□□ -1.73
RPN13	YLR421C	LEE1	Q02799	301 aa	Known RBP	4.23	□□□□□ -1.73
RPN13	YLR421C	CLF1	Q12309	687 aa	Predicted RBP	4.23	□□□□□ -1.73
RPN13	YLR421C	CHZ1	P40019	153 aa	Predicted RBP	4.22	□□□□□ -1.73
RPN13	YLR421C	MRK1	P50873	501 aa		4.22	□□□□□ -1.73
RPN13	YLR421C	YGR151C	P53287	111 aa		4.22	□□□□□ -1.73
RPN13	YLR421C	ALG12	P53730	551 aa		4.22	□□□□□ -1.73
RPN13	YLR421C	YOR131C	Q12486	218 aa		4.22	□□□□□ -1.73
RPN13	YLR421C	STE12	P13574	688 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	RPA135	P22138	1203 aa	Known RBP	4.21	□□□□□ -1.74
RPN13	YLR421C	KCC4	P25389	1037 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	BCS1	P32839	456 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	GID8	P40208	455 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	OSW7	P43611	510 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	PCL10	P53124	433 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	SPC98	P53540	846 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	ARP4	P80428	489 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	SEC5	P89102	971 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	NHX1	Q04121	633 aa		4.21	□□□□□ -1.74
RPN13	YLR421C	ERG11	P10614	530 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	VBA3	P25594	458 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	SRP40	P32583	406 aa	Predicted RBP	4.2	□□□□□ -1.74
RPN13	YLR421C	TIM23	P32897	222 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	YKR018C	P36114	725 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	HSL7	P38274	827 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	YHR097C	P38809	366 aa	Known RBP	4.2	□□□□□ -1.74
RPN13	YLR421C	DSS1	P39112	969 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	FMP30	Q02883	468 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	SEG1	Q04279	960 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	THI22	Q06490	572 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	DIA2	Q08496	732 aa	Predicted RBP	4.2	□□□□□ -1.74
RPN13	YLR421C	SLK19	Q08581	821 aa	Known RBP	4.2	□□□□□ -1.74
RPN13	YLR421C	MDM12	Q92328	271 aa		4.2	□□□□□ -1.74
RPN13	YLR421C	UFD4	P33202	1483 aa		4.19	□□□□□ -1.74
RPN13	YLR421C	MEF1	P25039	761 aa		4.19	□□□□□ -1.74
RPN13	YLR421C	KSP1	P38691	1029 aa	Known RBP	4.19	□□□□□ -1.74
RPN13	YLR421C	PIG2	P40187	538 aa		4.19	□□□□□ -1.74
RPN13	YLR421C	RSC8	P43609	557 aa	Known RBP	4.19	□□□□□ -1.74
RPN13	YLR421C	TCB3	Q03640	1545 aa	Known RBP	4.18	□□□□□ -1.74
RPN13	YLR421C	ABF1	P14164	731 aa		4.18	□□□□□ -1.74
RPN13	YLR421C	GSY1	P23337	708 aa		4.18	□□□□□ -1.74
RPN13	YLR421C	HOG1	P32485	435 aa		4.18	□□□□□ -1.74
RPN13	YLR421C	YKL091C	P33324	310 aa	Known RBP	4.18	□□□□□ -1.74
RPN13	YLR421C	YMC2	P38087	329 aa		4.18	□□□□□ -1.74
RPN13	YLR421C	BIT2	P38346	545 aa		4.18	□□□□□ -1.74
RPN13	YLR421C	MIT1	P40002	666 aa		4.18	□□□□□ -1.74
RPN13	YLR421C	YDL086W	Q07505	273 aa		4.18	□□□□□ -1.74
RPN13	YLR421C	CHS5	Q12114	671 aa	Known RBP	4.18	□□□□□ -1.74
RPN13	YLR421C	XRN1	P22147	1528 aa	Known RBP	4.17	□□□□□ -1.74
RPN13	YLR421C	RAD18	P10862	487 aa		4.17	□□□□□ -1.74
RPN13	YLR421C	NUP1	P20676	1076 aa		4.17	□□□□□ -1.74
RPN13	YLR421C	PRP28	P23394	588 aa		4.17	□□□□□ -1.74
RPN13	YLR421C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPN13	YLR421C	APN2	P38207	520 aa		4.17	□□□□□ -1.74
RPN13	YLR421C	GAT1	P43574	510 aa		4.17	□□□□□ -1.74
RPN13	YLR421C	NMA2	P53204	395 aa		4.17	□□□□□ -1.74
RPN13	YLR421C	PHO5	P00635	467 aa		4.16	□□□□□ -1.74
RPN13	YLR421C	SRD1	P09007	221 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 177.4 ms