RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RPO21P04050 1733 aaKnown RBP5.18□□□□□ -1.58
USB1YLR132C TYS1P36421 394 aaKnown RBP5.18□□□□□ -1.58
USB1YLR132C YEN1P40028 759 aa5.18□□□□□ -1.58
USB1YLR132C MGS1P40151 587 aa5.18□□□□□ -1.58
USB1YLR132C MUK1Q02866 612 aa5.18□□□□□ -1.58
USB1YLR132C HFD1Q04458 532 aa5.18□□□□□ -1.58
USB1YLR132C TMN2Q04562 672 aa5.18□□□□□ -1.58
USB1YLR132C MCH5Q08777 521 aa5.18□□□□□ -1.58
USB1YLR132C FAP7Q12055 197 aaPredicted RBP5.18□□□□□ -1.58
USB1YLR132C SSB1P11484 613 aaKnown RBP5.17□□□□□ -1.58
USB1YLR132C PCM1P38628 557 aaKnown RBP5.17□□□□□ -1.58
USB1YLR132C SSB2P40150 613 aaKnown RBP5.17□□□□□ -1.58
USB1YLR132C SSY5P47002 699 aa5.17□□□□□ -1.58
USB1YLR132C HXT16P47185 567 aa5.17□□□□□ -1.58
USB1YLR132C ZIP2P53061 704 aa5.17□□□□□ -1.58
USB1YLR132C MET13P53128 600 aa5.17□□□□□ -1.58
USB1YLR132C MRPS35P53292 345 aa5.17□□□□□ -1.58
USB1YLR132C ATG33Q06485 197 aa5.17□□□□□ -1.58
USB1YLR132C THI21Q08975 551 aa5.17□□□□□ -1.58
USB1YLR132C YPT53P36019 220 aa5.16□□□□□ -1.58
USB1YLR132C RPP1P38786 293 aa5.16□□□□□ -1.58
USB1YLR132C ELO3P40319 345 aa5.16□□□□□ -1.58
USB1YLR132C VHR1P40522 640 aa5.16□□□□□ -1.58
USB1YLR132C BFA1P47113 574 aa5.16□□□□□ -1.58
USB1YLR132C MTR3P48240 250 aaPredicted RBP5.16□□□□□ -1.58
USB1YLR132C ASI2P53895 289 aa5.16□□□□□ -1.58
USB1YLR132C FRE5Q08908 694 aa5.16□□□□□ -1.58
USB1YLR132C ACF2Q12168 779 aa5.16□□□□□ -1.58
USB1YLR132C YOR093CQ12275 1648 aa5.15□□□□□ -1.58
USB1YLR132C MET3P08536 511 aa5.15□□□□□ -1.59
USB1YLR132C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
USB1YLR132C PRP19P32523 503 aaKnown RBP5.15□□□□□ -1.59
USB1YLR132C CKB2P38930 258 aa5.15□□□□□ -1.59
USB1YLR132C BNA2P47125 453 aa5.15□□□□□ -1.59
USB1YLR132C AIM14P53109 570 aa5.15□□□□□ -1.59
USB1YLR132C YBP2P53169 641 aa5.15□□□□□ -1.59
USB1YLR132C RPN7Q06103 429 aaKnown RBP5.15□□□□□ -1.59
USB1YLR132C SAK1P38990 1142 aa5.14□□□□□ -1.59
USB1YLR132C FKH2P41813 862 aa5.14□□□□□ -1.59
USB1YLR132C ORC4P54791 529 aa5.14□□□□□ -1.59
USB1YLR132C PKH1Q03407 766 aa5.14□□□□□ -1.59
USB1YLR132C DLT1Q04216 342 aa5.14□□□□□ -1.59
USB1YLR132C HMG1P12683 1054 aa5.13□□□□□ -1.59
USB1YLR132C PPS1P38148 807 aa5.13□□□□□ -1.59
USB1YLR132C TDA3P38758 523 aa5.13□□□□□ -1.59
USB1YLR132C NUP170P38181 1502 aa5.13□□□□□ -1.59
USB1YLR132C SPO14P36126 1683 aa5.12□□□□□ -1.59
USB1YLR132C CAF20P12962 161 aaKnown RBP5.12□□□□□ -1.59
USB1YLR132C TOM20P35180 183 aa5.12□□□□□ -1.59
USB1YLR132C QRI1P43123 477 aaKnown RBP5.12□□□□□ -1.59
USB1YLR132C MUP1P50276 574 aa5.12□□□□□ -1.59
USB1YLR132C UBC9P50623 157 aaPredicted RBP5.12□□□□□ -1.59
USB1YLR132C TIM44Q01852 431 aa5.12□□□□□ -1.59
USB1YLR132C MTQ2Q03920 221 aaPredicted RBP5.12□□□□□ -1.59
USB1YLR132C YDR338CQ05497 695 aa5.12□□□□□ -1.59
USB1YLR132C ADY4Q05955 493 aa5.12□□□□□ -1.59
USB1YLR132C YTM1Q12024 460 aaPredicted RBP5.12□□□□□ -1.59
USB1YLR132C SPP41P38904 1435 aa5.12□□□□□ -1.59
USB1YLR132C YKR018CP36114 725 aa5.11□□□□□ -1.59
USB1YLR132C YKR051WP36142 418 aa5.11□□□□□ -1.59
USB1YLR132C MAL31P38156 614 aa5.11□□□□□ -1.59
USB1YLR132C YBR053CP38235 358 aa5.11□□□□□ -1.59
USB1YLR132C YJR096WP47137 282 aa5.11□□□□□ -1.59
USB1YLR132C GPD1Q00055 391 aaKnown RBP5.11□□□□□ -1.59
USB1YLR132C MUS81Q04149 632 aaPredicted RBP5.11□□□□□ -1.59
USB1YLR132C IRC10Q08118 586 aa5.11□□□□□ -1.59
USB1YLR132C POL1P13382 1468 aa5.11□□□□□ -1.59
USB1YLR132C VTH1P40438 1549 aa5.11□□□□□ -1.59
USB1YLR132C VTH2P40890 1549 aa5.11□□□□□ -1.59
USB1YLR132C DOP1Q03921 1698 aa5.11□□□□□ -1.59
USB1YLR132C MRC1P25588 1096 aa5.1□□□□□ -1.59
USB1YLR132C CCR4P31384 837 aaKnown RBP5.1□□□□□ -1.59
USB1YLR132C MTH1P35198 433 aa5.1□□□□□ -1.59
USB1YLR132C YKR075CP36155 307 aa5.1□□□□□ -1.59
USB1YLR132C PFA3P42836 336 aa5.1□□□□□ -1.59
USB1YLR132C GZF3P42944 551 aaKnown RBP5.1□□□□□ -1.59
USB1YLR132C RET2P43621 546 aa5.1□□□□□ -1.59
USB1YLR132C STU2P46675 888 aa5.1□□□□□ -1.59
USB1YLR132C YGR153WP48238 217 aa5.1□□□□□ -1.59
USB1YLR132C GND2P53319 492 aa5.1□□□□□ -1.59
USB1YLR132C SMC4Q12267 1418 aa5.1□□□□□ -1.59
USB1YLR132C YLR149CQ99296 730 aa5.1□□□□□ -1.59
USB1YLR132C YOR1P53049 1477 aa5.09□□□□□ -1.59
USB1YLR132C APT2P36973 181 aa5.09□□□□□ -1.59
USB1YLR132C PCL10P53124 433 aa5.09□□□□□ -1.59
USB1YLR132C TRE2Q08693 809 aa5.09□□□□□ -1.59
USB1YLR132C Q0142Q9ZZW4 58 aa5.09□□□□□ -1.59
USB1YLR132C TSC11P40061 1430 aa5.08□□□□□ -1.6
USB1YLR132C DID4P36108 232 aa5.08□□□□□ -1.6
USB1YLR132C YBR259WP38338 688 aa5.08□□□□□ -1.6
USB1YLR132C SDS3P40505 327 aa5.08□□□□□ -1.6
USB1YLR132C GPP1P41277 250 aaKnown RBP5.08□□□□□ -1.6
USB1YLR132C YLR415CO13578 112 aa5.07□□□□□ -1.6
USB1YLR132C MIH1P23748 554 aa5.07□□□□□ -1.6
USB1YLR132C PAF1P38351 445 aa5.07□□□□□ -1.6
USB1YLR132C YHL017WP38745 532 aa5.07□□□□□ -1.6
USB1YLR132C MIP6P38760 659 aaKnown RBP5.07□□□□□ -1.6
USB1YLR132C MNN11P46985 422 aaKnown RBP5.07□□□□□ -1.6
USB1YLR132C YJL163CP46996 555 aa5.07□□□□□ -1.6
USB1YLR132C DAS1P47005 663 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms