RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W JIP3O13555 125 aa4.93□□□□□ -1.62
ABF1YKL112W ENO1P00924 437 aaKnown RBP4.93□□□□□ -1.62
ABF1YKL112W RPS3P05750 240 aaKnown RBP4.93□□□□□ -1.62
ABF1YKL112W PRP22P24384 1145 aaKnown RBP4.93□□□□□ -1.62
ABF1YKL112W DOA4P32571 926 aa4.93□□□□□ -1.62
ABF1YKL112W NGR1P32831 672 aaKnown RBP4.93□□□□□ -1.62
ABF1YKL112W MRP4P32902 394 aa4.93□□□□□ -1.62
ABF1YKL112W SWH1P35845 1188 aa4.93□□□□□ -1.62
ABF1YKL112W YKR018CP36114 725 aa4.93□□□□□ -1.62
ABF1YKL112W BCD1P38772 366 aa4.93□□□□□ -1.62
ABF1YKL112W LYS14P40971 790 aa4.93□□□□□ -1.62
ABF1YKL112W AIP1P46680 615 aaKnown RBP4.93□□□□□ -1.62
ABF1YKL112W FYV8P46949 817 aaKnown RBP4.93□□□□□ -1.62
ABF1YKL112W UBP15P50101 1230 aa4.93□□□□□ -1.62
ABF1YKL112W DIP5P53388 608 aa4.93□□□□□ -1.62
ABF1YKL112W FCP1Q03254 732 aa4.93□□□□□ -1.62
ABF1YKL112W UFO1Q04511 668 aa4.93□□□□□ -1.62
ABF1YKL112W HIP1P06775 603 aa4.92□□□□□ -1.62
ABF1YKL112W PUT4P15380 627 aa4.92□□□□□ -1.62
ABF1YKL112W APA1P16550 321 aaKnown RBP4.92□□□□□ -1.62
ABF1YKL112W ORC2P32833 620 aa4.92□□□□□ -1.62
ABF1YKL112W LHS1P36016 881 aa4.92□□□□□ -1.62
ABF1YKL112W OLA1P38219 394 aaKnown RBP4.92□□□□□ -1.62
ABF1YKL112W YNL034WP53963 612 aa4.92□□□□□ -1.62
ABF1YKL112W YNL018CP53976 612 aa4.92□□□□□ -1.62
ABF1YKL112W YDR131CQ03899 556 aa4.92□□□□□ -1.62
ABF1YKL112W MRX10Q05648 414 aa4.92□□□□□ -1.62
ABF1YKL112W MET7Q08645 548 aa4.92□□□□□ -1.62
ABF1YKL112W LDB19Q12502 818 aa4.92□□□□□ -1.62
ABF1YKL112W MYO1P08964 1928 aa4.92□□□□□ -1.62
ABF1YKL112W RAD50P12753 1312 aa4.92□□□□□ -1.62
ABF1YKL112W STE3P06783 470 aa4.92□□□□□ -1.62
ABF1YKL112W DSF1P0CX08 502 aa4.92□□□□□ -1.62
ABF1YKL112W YNR073CP0CX09 502 aa4.92□□□□□ -1.62
ABF1YKL112W RPL8AP17076 256 aaKnown RBP4.92□□□□□ -1.62
ABF1YKL112W PRP6P19735 899 aaPredicted RBP4.92□□□□□ -1.62
ABF1YKL112W HSP60P19882 572 aaKnown RBP4.92□□□□□ -1.62
ABF1YKL112W PRE10P21242 288 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
ABF1YKL112W DMC1P25453 334 aa4.92□□□□□ -1.62
ABF1YKL112W KTR1P27810 393 aaKnown RBP4.92□□□□□ -1.62
ABF1YKL112W THI4P32318 326 aa4.92□□□□□ -1.62
ABF1YKL112W KSP1P38691 1029 aaKnown RBP4.92□□□□□ -1.62
ABF1YKL112W SBE2P42223 864 aaKnown RBP4.92□□□□□ -1.62
ABF1YKL112W YPP1P46951 817 aa4.92□□□□□ -1.62
ABF1YKL112W RNR4P49723 345 aaKnown RBP4.92□□□□□ -1.62
ABF1YKL112W RET3P53600 189 aa4.92□□□□□ -1.62
ABF1YKL112W RPM2Q02773 1202 aa4.92□□□□□ -1.62
ABF1YKL112W SEC39Q12745 709 aa4.92□□□□□ -1.62
ABF1YKL112W ILS1P09436 1072 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W PWP1P21304 576 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W SPS22P25380 463 aa4.91□□□□□ -1.62
ABF1YKL112W DHR2P36009 735 aaPredicted RBP4.91□□□□□ -1.62
ABF1YKL112W ALG3P38179 458 aa4.91□□□□□ -1.62
ABF1YKL112W REI1P38344 393 aaPredicted RBP4.91□□□□□ -1.62
ABF1YKL112W MSG5P38590 489 aa4.91□□□□□ -1.62
ABF1YKL112W SKP2P42843 763 aa4.91□□□□□ -1.62
ABF1YKL112W PUS6P53294 404 aa4.91□□□□□ -1.62
ABF1YKL112W PKH3Q03306 898 aaPredicted RBP4.91□□□□□ -1.62
ABF1YKL112W FKS1P38631 1876 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W MIS1P09440 975 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W STE6P12866 1290 aa4.91□□□□□ -1.62
ABF1YKL112W CDC48P25694 835 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W RDH54P38086 958 aa4.91□□□□□ -1.62
ABF1YKL112W OSH3P38713 996 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W RRM3P38766 723 aa4.91□□□□□ -1.62
ABF1YKL112W TIF11P38912 153 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W SAP1P39955 897 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W GCR2Q01722 534 aa4.91□□□□□ -1.62
ABF1YKL112W SRC1Q03707 834 aa4.91□□□□□ -1.62
ABF1YKL112W ARO80Q04052 950 aa4.91□□□□□ -1.62
ABF1YKL112W GSF2Q04697 403 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W AVL9Q12500 764 aa4.91□□□□□ -1.62
ABF1YKL112W LSO2Q3E772 92 aaKnown RBP4.91□□□□□ -1.62
ABF1YKL112W COQ4O13525 335 aa4.9□□□□□ -1.62
ABF1YKL112W PMA1P05030 918 aaKnown RBP4.9□□□□□ -1.62
ABF1YKL112W CYT1P07143 309 aa4.9□□□□□ -1.62
ABF1YKL112W SES1P07284 462 aaKnown RBP4.9□□□□□ -1.62
ABF1YKL112W MIH1P23748 554 aa4.9□□□□□ -1.62
ABF1YKL112W MET4P32389 672 aa4.9□□□□□ -1.62
ABF1YKL112W MGM101P32787 269 aaKnown RBP4.9□□□□□ -1.62
ABF1YKL112W VPS17P32913 551 aa4.9□□□□□ -1.62
ABF1YKL112W AFR1P33304 620 aa4.9□□□□□ -1.62
ABF1YKL112W HCS1P34243 683 aa4.9□□□□□ -1.62
ABF1YKL112W FTH1P38310 465 aa4.9□□□□□ -1.62
ABF1YKL112W SRP72P38688 640 aaKnown RBP4.9□□□□□ -1.62
ABF1YKL112W ACA1P39970 489 aa4.9□□□□□ -1.62
ABF1YKL112W GYP8P43570 497 aa4.9□□□□□ -1.62
ABF1YKL112W BNA6P43619 295 aa4.9□□□□□ -1.62
ABF1YKL112W SSN8P47821 323 aa4.9□□□□□ -1.62
ABF1YKL112W BRE5P53741 515 aaKnown RBP4.9□□□□□ -1.62
ABF1YKL112W MET14Q02196 202 aa4.9□□□□□ -1.62
ABF1YKL112W ECM23Q02710 187 aa4.9□□□□□ -1.62
ABF1YKL112W ECM7Q06200 448 aa4.9□□□□□ -1.62
ABF1YKL112W SCM3Q12334 223 aa4.9□□□□□ -1.62
ABF1YKL112W ENA1P13587 1091 aa4.89□□□□□ -1.63
ABF1YKL112W ADP1P25371 1049 aa4.89□□□□□ -1.63
ABF1YKL112W PER1P25625 357 aa4.89□□□□□ -1.63
ABF1YKL112W BMH1P29311 267 aaKnown RBP4.89□□□□□ -1.63
ABF1YKL112W RPN2P32565 945 aaKnown RBP4.89□□□□□ -1.63
ABF1YKL112W CSE1P33307 960 aa4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms