RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeast

Gene IST3, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IST3	YIR005W	Q0142	Q9ZZW4	58 aa		4.68	□□□□□ -1.66
IST3	YIR005W	PEX1	P24004	1043 aa		4.67	□□□□□ -1.66
IST3	YIR005W	FUB1	P25659	250 aa		4.67	□□□□□ -1.66
IST3	YIR005W	GMH1	P36125	273 aa		4.67	□□□□□ -1.66
IST3	YIR005W	CAF16	P43569	289 aa		4.67	□□□□□ -1.66
IST3	YIR005W	RGC1	Q06108	1083 aa	Known RBP	4.67	□□□□□ -1.66
IST3	YIR005W	YKR018C	P36114	725 aa		4.66	□□□□□ -1.66
IST3	YIR005W	YKR051W	P36142	418 aa		4.66	□□□□□ -1.66
IST3	YIR005W	GLO1	P50107	326 aa		4.66	□□□□□ -1.66
IST3	YIR005W	PCL10	P53124	433 aa		4.66	□□□□□ -1.66
IST3	YIR005W	SEC5	P89102	971 aa		4.66	□□□□□ -1.66
IST3	YIR005W	SEG1	Q04279	960 aa		4.66	□□□□□ -1.66
IST3	YIR005W	RPN7	Q06103	429 aa	Known RBP	4.66	□□□□□ -1.66
IST3	YIR005W	YOR131C	Q12486	218 aa		4.66	□□□□□ -1.66
IST3	YIR005W	MDM12	Q92328	271 aa		4.66	□□□□□ -1.66
IST3	YIR005W	GSY1	P23337	708 aa		4.65	□□□□□ -1.67
IST3	YIR005W	KCC4	P25389	1037 aa		4.65	□□□□□ -1.67
IST3	YIR005W	SET3	P36124	751 aa		4.65	□□□□□ -1.67
IST3	YIR005W	HSL7	P38274	827 aa		4.65	□□□□□ -1.67
IST3	YIR005W	RIM13	Q03792	727 aa		4.65	□□□□□ -1.67
IST3	YIR005W	OSW1	Q08692	278 aa		4.65	□□□□□ -1.67
IST3	YIR005W	CDC9	P04819	755 aa		4.64	□□□□□ -1.67
IST3	YIR005W	ERR1	P0CX10	437 aa		4.64	□□□□□ -1.67
IST3	YIR005W	ERR2	P0CX11	437 aa		4.64	□□□□□ -1.67
IST3	YIR005W	ABF1	P14164	731 aa		4.64	□□□□□ -1.67
IST3	YIR005W	NOP9	P47077	666 aa	Known RBP	4.64	□□□□□ -1.67
IST3	YIR005W	NNF1	P47149	201 aa		4.64	□□□□□ -1.67
IST3	YIR005W	NHX1	Q04121	633 aa		4.64	□□□□□ -1.67
IST3	YIR005W	THI22	Q06490	572 aa		4.64	□□□□□ -1.67
IST3	YIR005W	DIA2	Q08496	732 aa	Predicted RBP	4.64	□□□□□ -1.67
IST3	YIR005W	SLK19	Q08581	821 aa	Known RBP	4.64	□□□□□ -1.67
IST3	YIR005W	PRP28	P23394	588 aa		4.63	□□□□□ -1.67
IST3	YIR005W	MIH1	P23748	554 aa		4.63	□□□□□ -1.67
IST3	YIR005W	BIT2	P38346	545 aa		4.63	□□□□□ -1.67
IST3	YIR005W	PIG2	P40187	538 aa		4.63	□□□□□ -1.67
IST3	YIR005W	BMS1	Q08965	1183 aa	Known RBP	4.63	□□□□□ -1.67
IST3	YIR005W	CIT2	P08679	460 aa		4.62	□□□□□ -1.67
IST3	YIR005W	HOG1	P32485	435 aa		4.62	□□□□□ -1.67
IST3	YIR005W	COX18	P53239	316 aa		4.62	□□□□□ -1.67
IST3	YIR005W	YGR151C	P53287	111 aa		4.62	□□□□□ -1.67
IST3	YIR005W	ECM3	Q99252	613 aa		4.62	□□□□□ -1.67
IST3	YIR005W	BCS1	P32839	456 aa		4.61	□□□□□ -1.67
IST3	YIR005W	LTP1	P40347	161 aa		4.61	□□□□□ -1.67
IST3	YIR005W	RSC8	P43609	557 aa	Known RBP	4.61	□□□□□ -1.67
IST3	YIR005W	RPA135	P22138	1203 aa	Known RBP	4.6	□□□□□ -1.67
IST3	YIR005W	APN2	P38207	520 aa		4.6	□□□□□ -1.67
IST3	YIR005W	ARP4	P80428	489 aa		4.6	□□□□□ -1.67
IST3	YIR005W	CHS5	Q12114	671 aa	Known RBP	4.6	□□□□□ -1.67
IST3	YIR005W	RAD18	P10862	487 aa		4.59	□□□□□ -1.67
IST3	YIR005W	VBA3	P25594	458 aa		4.59	□□□□□ -1.67
IST3	YIR005W	SEC6	P32844	805 aa		4.59	□□□□□ -1.67
IST3	YIR005W	TIM23	P32897	222 aa		4.59	□□□□□ -1.67
IST3	YIR005W	DSS1	P39112	969 aa		4.59	□□□□□ -1.67
IST3	YIR005W	SET2	P46995	733 aa	Known RBP	4.59	□□□□□ -1.67
IST3	YIR005W	BNA3	P47039	444 aa	Known RBP	4.59	□□□□□ -1.67
IST3	YIR005W	SPC98	P53540	846 aa		4.59	□□□□□ -1.67
IST3	YIR005W	YDL086W	Q07505	273 aa		4.59	□□□□□ -1.67
IST3	YIR005W	YOL098C	Q12496	1037 aa		4.59	□□□□□ -1.67
IST3	YIR005W	SRD1	P09007	221 aa		4.58	□□□□□ -1.68
IST3	YIR005W	ERG11	P10614	530 aa		4.58	□□□□□ -1.68
IST3	YIR005W	STE12	P13574	688 aa		4.58	□□□□□ -1.68
IST3	YIR005W	MEF1	P25039	761 aa		4.58	□□□□□ -1.68
IST3	YIR005W	SAT4	P25333	603 aa	Known RBP	4.58	□□□□□ -1.68
IST3	YIR005W	YMC2	P38087	329 aa		4.58	□□□□□ -1.68
IST3	YIR005W	KSP1	P38691	1029 aa	Known RBP	4.58	□□□□□ -1.68
IST3	YIR005W	RPN4	Q03465	531 aa		4.58	□□□□□ -1.68
IST3	YIR005W	COG8	Q04632	607 aa		4.58	□□□□□ -1.68
IST3	YIR005W	PGK1	P00560	416 aa	Known RBP	4.57	□□□□□ -1.68
IST3	YIR005W	MIT1	P40002	666 aa		4.57	□□□□□ -1.68
IST3	YIR005W	DOT6	P40059	670 aa	Known RBP	4.57	□□□□□ -1.68
IST3	YIR005W	YNL195C	P40168	261 aa		4.57	□□□□□ -1.68
IST3	YIR005W	LEE1	Q02799	301 aa	Known RBP	4.57	□□□□□ -1.68
IST3	YIR005W	FMP30	Q02883	468 aa		4.57	□□□□□ -1.68
IST3	YIR005W	YSH1	Q06224	779 aa	Predicted RBP	4.57	□□□□□ -1.68
IST3	YIR005W	PHO5	P00635	467 aa		4.56	□□□□□ -1.68
IST3	YIR005W	SRP40	P32583	406 aa	Predicted RBP	4.56	□□□□□ -1.68
IST3	YIR005W	UGP1	P32861	499 aa	Known RBP	4.56	□□□□□ -1.68
IST3	YIR005W	CTP1	P38152	299 aa		4.56	□□□□□ -1.68
IST3	YIR005W	MPS3	P47069	682 aa		4.56	□□□□□ -1.68
IST3	YIR005W	BRE5	P53741	515 aa	Known RBP	4.56	□□□□□ -1.68
IST3	YIR005W	YLR125W	Q12138	136 aa		4.56	□□□□□ -1.68
IST3	YIR005W	ADE5,7	P07244	802 aa	Known RBP	4.55	□□□□□ -1.68
IST3	YIR005W	PTP1	P25044	335 aa		4.55	□□□□□ -1.68
IST3	YIR005W	FEN2	P25621	512 aa	Known RBP	4.55	□□□□□ -1.68
IST3	YIR005W	NTH1	P32356	751 aa		4.55	□□□□□ -1.68
IST3	YIR005W	APL3	P38065	1025 aa		4.55	□□□□□ -1.68
IST3	YIR005W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
IST3	YIR005W	SSZ1	P38788	538 aa	Known RBP	4.55	□□□□□ -1.68
IST3	YIR005W	PMC1	P38929	1173 aa	Predicted RBP	4.55	□□□□□ -1.68
IST3	YIR005W	GAT1	P43574	510 aa		4.55	□□□□□ -1.68
IST3	YIR005W	LAM4	P38800	1345 aa		4.54	□□□□□ -1.68
IST3	YIR005W	ERG20	P08524	352 aa	Known RBP	4.54	□□□□□ -1.68
IST3	YIR005W	YKL091C	P33324	310 aa	Known RBP	4.54	□□□□□ -1.68
IST3	YIR005W	YEL1	P34225	687 aa		4.54	□□□□□ -1.68
IST3	YIR005W	YHR097C	P38809	366 aa	Known RBP	4.54	□□□□□ -1.68
IST3	YIR005W	KHA1	P40309	873 aa		4.54	□□□□□ -1.68
IST3	YIR005W	PMT6	P42934	759 aa		4.54	□□□□□ -1.68
IST3	YIR005W	YJR039W	P47107	1121 aa		4.54	□□□□□ -1.68
IST3	YIR005W	RFX1	P48743	811 aa		4.54	□□□□□ -1.68
IST3	YIR005W	ASN1	P49089	572 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms