RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	NPC2	Q12408	173 aa		4.55	□□□□□ -1.68
YPT35	YHR105W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
YPT35	YHR105W	TUB3	P09734	445 aa	Known RBP	4.54	□□□□□ -1.68
YPT35	YHR105W	GLN4	P13188	809 aa	Known RBP	4.54	□□□□□ -1.68
YPT35	YHR105W	SED4	P25365	1065 aa		4.54	□□□□□ -1.68
YPT35	YHR105W	PTP2	P29461	750 aa		4.54	□□□□□ -1.68
YPT35	YHR105W	AKL1	P38080	1108 aa	Known RBP	4.54	□□□□□ -1.68
YPT35	YHR105W	SAK1	P38990	1142 aa		4.54	□□□□□ -1.68
YPT35	YHR105W	VID28	P40547	921 aa		4.54	□□□□□ -1.68
YPT35	YHR105W	PFA3	P42836	336 aa		4.54	□□□□□ -1.68
YPT35	YHR105W	YGR021W	P53212	290 aa		4.54	□□□□□ -1.68
YPT35	YHR105W	MUS81	Q04149	632 aa	Predicted RBP	4.54	□□□□□ -1.68
YPT35	YHR105W	MLC2	Q06580	163 aa		4.54	□□□□□ -1.68
YPT35	YHR105W	MSS18	P08593	268 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	HCA4	P20448	770 aa	Known RBP	4.53	□□□□□ -1.68
YPT35	YHR105W	SEC21	P32074	935 aa	Known RBP	4.53	□□□□□ -1.68
YPT35	YHR105W	HXT4	P32467	576 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	YKU70	P32807	602 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	YHL041W	P38730	149 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	MSS4	P38994	779 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	EAF5	P39995	279 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	SLD3	P53135	668 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	ASI2	P53895	289 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	NOP15	P53927	220 aa	Predicted RBP	4.53	□□□□□ -1.68
YPT35	YHR105W	YLR407W	Q06070	228 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	YPS7	Q06325	596 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	OMS1	Q06668	471 aa		4.53	□□□□□ -1.68
YPT35	YHR105W	RRP6	Q12149	733 aa	Known RBP	4.53	□□□□□ -1.68
YPT35	YHR105W	STE11	P23561	717 aa		4.52	□□□□□ -1.69
YPT35	YHR105W	IMG2	P25642	146 aa	Predicted RBP	4.52	□□□□□ -1.69
YPT35	YHR105W	YHR202W	P38887	602 aa		4.52	□□□□□ -1.69
YPT35	YHR105W	EMP65	P40085	556 aa		4.52	□□□□□ -1.69
YPT35	YHR105W	RNR4	P49723	345 aa	Known RBP	4.52	□□□□□ -1.69
YPT35	YHR105W	MNN10	P50108	393 aa	Known RBP	4.52	□□□□□ -1.69
YPT35	YHR105W	MCM6	P53091	1017 aa	Known RBP	4.52	□□□□□ -1.69
YPT35	YHR105W	LAS17	Q12446	633 aa		4.52	□□□□□ -1.69
YPT35	YHR105W	RPS17A	P02407	136 aa	Known RBP	4.51	□□□□□ -1.69
YPT35	YHR105W	TUB2	P02557	457 aa	Known RBP	4.51	□□□□□ -1.69
YPT35	YHR105W	RPP2A	P05319	106 aa	Known RBP	4.51	□□□□□ -1.69
YPT35	YHR105W	RPS17B	P14127	136 aa	Known RBP	4.51	□□□□□ -1.69
YPT35	YHR105W	KAR4	P25583	335 aa		4.51	□□□□□ -1.69
YPT35	YHR105W	GID8	P40208	455 aa		4.51	□□□□□ -1.69
YPT35	YHR105W	HIS6	P40545	261 aa		4.51	□□□□□ -1.69
YPT35	YHR105W	IES1	P43579	692 aa		4.51	□□□□□ -1.69
YPT35	YHR105W	MTR3	P48240	250 aa	Predicted RBP	4.51	□□□□□ -1.69
YPT35	YHR105W	EXG2	P52911	562 aa		4.51	□□□□□ -1.69
YPT35	YHR105W	CNM67	P53865	581 aa	Known RBP	4.51	□□□□□ -1.69
YPT35	YHR105W	RCR2	Q03446	210 aa	Known RBP	4.51	□□□□□ -1.69
YPT35	YHR105W	BRE1	Q07457	700 aa	Known RBP	4.51	□□□□□ -1.69
YPT35	YHR105W	YDL121C	Q07541	149 aa		4.51	□□□□□ -1.69
YPT35	YHR105W	IME1	P21190	360 aa		4.5	□□□□□ -1.69
YPT35	YHR105W	YKL133C	P36066	463 aa		4.5	□□□□□ -1.69
YPT35	YHR105W	EXO84	P38261	753 aa		4.5	□□□□□ -1.69
YPT35	YHR105W	VHR1	P40522	640 aa		4.5	□□□□□ -1.69
YPT35	YHR105W	QRI7	P43122	407 aa		4.5	□□□□□ -1.69
YPT35	YHR105W	SET2	P46995	733 aa	Known RBP	4.5	□□□□□ -1.69
YPT35	YHR105W	MOT3	P54785	490 aa	Known RBP	4.5	□□□□□ -1.69
YPT35	YHR105W	CEF1	Q03654	590 aa	Predicted RBP	4.5	□□□□□ -1.69
YPT35	YHR105W	VMS1	Q04311	632 aa	Known RBP	4.5	□□□□□ -1.69
YPT35	YHR105W	GSF2	Q04697	403 aa	Known RBP	4.5	□□□□□ -1.69
YPT35	YHR105W	STP4	Q07351	490 aa		4.5	□□□□□ -1.69
YPT35	YHR105W	NGL1	Q08213	363 aa	Known RBP	4.5	□□□□□ -1.69
YPT35	YHR105W	CWC2	Q12046	339 aa	Predicted RBP	4.5	□□□□□ -1.69
YPT35	YHR105W	ADE2	P21264	571 aa	Known RBP	4.49	□□□□□ -1.69
YPT35	YHR105W	APN2	P38207	520 aa		4.49	□□□□□ -1.69
YPT35	YHR105W	RPT2	P40327	437 aa	Known RBP	4.49	□□□□□ -1.69
YPT35	YHR105W	YIL092W	P40497	633 aa		4.49	□□□□□ -1.69
YPT35	YHR105W	IRC5	P43610	853 aa		4.49	□□□□□ -1.69
YPT35	YHR105W	MRPS35	P53292	345 aa		4.49	□□□□□ -1.69
YPT35	YHR105W	CIA1	Q05583	330 aa		4.49	□□□□□ -1.69
YPT35	YHR105W	YOL114C	Q12322	202 aa		4.49	□□□□□ -1.69
YPT35	YHR105W	YLR415C	O13578	112 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	PFK1	P16861	987 aa	Known RBP	4.48	□□□□□ -1.69
YPT35	YHR105W	HCM1	P25364	564 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	DBF20	P32328	564 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	YPT7	P32939	208 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	SIC1	P38634	284 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	RIM4	P38741	713 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	PZF1	P39933	429 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	YNL195C	P40168	261 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	PHO23	P50947	330 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	VPS72	Q03388	795 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	HMO1	Q03973	246 aa	Known RBP	4.48	□□□□□ -1.69
YPT35	YHR105W	NUR1	Q12066	484 aa		4.48	□□□□□ -1.69
YPT35	YHR105W	RTK1	Q12100	620 aa	Predicted RBP	4.48	□□□□□ -1.69
YPT35	YHR105W	PYC1	P11154	1178 aa	Known RBP	4.47	□□□□□ -1.69
YPT35	YHR105W	HOP1	P20050	605 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	CAD1	P24813	409 aa	Known RBP	4.47	□□□□□ -1.69
YPT35	YHR105W	MF(ALPHA)2	P32435	120 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	DCG1	P32460	244 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	TRM2	P33753	639 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	YKR075C	P36155	307 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	ACA1	P39970	489 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	ERR3	P42222	437 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	PUS4	P48567	403 aa	Known RBP	4.47	□□□□□ -1.69
YPT35	YHR105W	ERG5	P54781	538 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	ORC4	P54791	529 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	GPD1	Q00055	391 aa	Known RBP	4.47	□□□□□ -1.69
YPT35	YHR105W	ARG5,6	Q01217	863 aa		4.47	□□□□□ -1.69
YPT35	YHR105W	MTD1	Q02046	320 aa	Known RBP	4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms