RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W SRP54P20424 541 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W DOT6P40059 670 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W FAF1P40546 346 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W ASK10P48361 1146 aa2.45□□□□□ -2.02
NUP170YBL079W SPC98P53540 846 aa2.45□□□□□ -2.02
NUP170YBL079W SXM1Q04175 944 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W RTN1Q04947 295 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W YSH1Q06224 779 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W YOR022CQ12204 715 aa2.45□□□□□ -2.02
NUP170YBL079W YPK1P12688 680 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W RSR1P13856 272 aa2.45□□□□□ -2.02
NUP170YBL079W RDS1P25611 832 aa2.45□□□□□ -2.02
NUP170YBL079W EFB1P32471 206 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W HOG1P32485 435 aa2.45□□□□□ -2.02
NUP170YBL079W ECM32P32644 1121 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W GIP1P38229 639 aa2.45□□□□□ -2.02
NUP170YBL079W SMC2P38989 1170 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W AKR1P39010 764 aa2.45□□□□□ -2.02
NUP170YBL079W RPL34BP40525 121 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W ASE1P50275 885 aa2.45□□□□□ -2.02
NUP170YBL079W YGL108CP53139 140 aa2.45□□□□□ -2.02
NUP170YBL079W INA17Q02888 182 aa2.45□□□□□ -2.02
NUP170YBL079W PPN1Q04119 674 aa2.45□□□□□ -2.02
NUP170YBL079W APM4Q99186 491 aa2.45□□□□□ -2.02
NUP170YBL079W TEF1P02994 458 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W SWI3P32591 825 aa2.45□□□□□ -2.02
NUP170YBL079W YIL161WP40449 235 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W TFG2P41896 400 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W MNP1P53163 194 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W YGR012WP53206 393 aa2.45□□□□□ -2.02
NUP170YBL079W CEG1Q01159 459 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W MZM1Q03429 123 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W SHS1Q07657 551 aa2.45□□□□□ -2.02
NUP170YBL079W FMP25Q08023 583 aa2.45□□□□□ -2.02
NUP170YBL079W RTK1Q12100 620 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W RPS6AP0CX37 236 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W RPS6BP0CX38 236 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W ASP3-2P0CX77 362 aa2.45□□□□□ -2.02
NUP170YBL079W ASP3-3P0CX78 362 aa2.45□□□□□ -2.02
NUP170YBL079W ASP3-4P0CX79 362 aa2.45□□□□□ -2.02
NUP170YBL079W ASP3-1P0CZ17 362 aa2.45□□□□□ -2.02
NUP170YBL079W APL1P27351 700 aa2.45□□□□□ -2.02
NUP170YBL079W KIP1P28742 1111 aa2.45□□□□□ -2.02
NUP170YBL079W RAD16P31244 790 aa2.45□□□□□ -2.02
NUP170YBL079W PET10P36139 283 aa2.45□□□□□ -2.02
NUP170YBL079W SRP68P38687 599 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W EXO1P39875 702 aa2.45□□□□□ -2.02
NUP170YBL079W RPS10BP46784 105 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W GUF1P46943 645 aa2.45□□□□□ -2.02
NUP170YBL079W VTC4P47075 721 aa2.45□□□□□ -2.02
NUP170YBL079W ASN1P49089 572 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W PGA2P53903 129 aa2.45□□□□□ -2.02
NUP170YBL079W SUR7P54003 302 aa2.45□□□□□ -2.02
NUP170YBL079W RPL34AP87262 121 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W AIM32Q04689 311 aa2.45□□□□□ -2.02
NUP170YBL079W RPS10AQ08745 105 aaPredicted RBP2.45□□□□□ -2.02
NUP170YBL079W GNT1Q12096 491 aa2.45□□□□□ -2.02
NUP170YBL079W LEU9Q12166 604 aaKnown RBP2.45□□□□□ -2.02
NUP170YBL079W FKS1P38631 1876 aaKnown RBP2.44□□□□□ -2.02
NUP170YBL079W MIS1P09440 975 aaKnown RBP2.44□□□□□ -2.02
NUP170YBL079W MSH2P25847 964 aa2.44□□□□□ -2.02
NUP170YBL079W CCR4P31384 837 aaKnown RBP2.44□□□□□ -2.02
NUP170YBL079W TAF14P35189 244 aa2.44□□□□□ -2.02
NUP170YBL079W EFM2P38347 419 aa2.44□□□□□ -2.02
NUP170YBL079W CRP1P38845 465 aaKnown RBP2.44□□□□□ -2.02
NUP170YBL079W UME6P39001 836 aa2.44□□□□□ -2.02
NUP170YBL079W DAK2P43550 591 aa2.44□□□□□ -2.02
NUP170YBL079W BST1P43571 1029 aa2.44□□□□□ -2.02
NUP170YBL079W UBA2P52488 636 aa2.44□□□□□ -2.02
NUP170YBL079W ALT1P52893 592 aa2.44□□□□□ -2.02
NUP170YBL079W NMA2P53204 395 aa2.44□□□□□ -2.02
NUP170YBL079W CSL4P53859 292 aaPredicted RBP2.44□□□□□ -2.02
NUP170YBL079W SPP1Q03012 353 aa2.44□□□□□ -2.02
NUP170YBL079W SIZ1Q04195 904 aa2.44□□□□□ -2.02
NUP170YBL079W PRM6Q04705 352 aa2.44□□□□□ -2.02
NUP170YBL079W GAD1Q04792 585 aa2.44□□□□□ -2.02
NUP170YBL079W YLR012CQ07927 99 aa2.44□□□□□ -2.02
NUP170YBL079W YBR062CP38239 180 aa2.44□□□□□ -2.02
NUP170YBL079W GEM1P39722 662 aa2.44□□□□□ -2.02
NUP170YBL079W FIG4P42837 879 aa2.44□□□□□ -2.02
NUP170YBL079W YGL039WP53183 348 aaKnown RBP2.44□□□□□ -2.02
NUP170YBL079W COQ6P53318 479 aa2.44□□□□□ -2.02
NUP170YBL079W YGR266WP53326 701 aa2.44□□□□□ -2.02
NUP170YBL079W TIM8P57744 87 aa2.44□□□□□ -2.02
NUP170YBL079W YLR326WQ06170 240 aaKnown RBP2.44□□□□□ -2.02
NUP170YBL079W AAD4Q07747 329 aa2.44□□□□□ -2.02
NUP170YBL079W YOR389WQ08912 624 aa2.44□□□□□ -2.02
NUP170YBL079W YPL278CQ08990 100 aa2.44□□□□□ -2.02
NUP170YBL079W HIS4P00815 799 aaKnown RBP2.44□□□□□ -2.02
NUP170YBL079W PXL1P36166 706 aa2.44□□□□□ -2.02
NUP170YBL079W YPT35P38815 214 aaKnown RBP2.44□□□□□ -2.02
NUP170YBL079W FAU1P40099 211 aa2.44□□□□□ -2.02
NUP170YBL079W HXT10P43581 546 aa2.44□□□□□ -2.02
NUP170YBL079W YGL081WP53156 320 aa2.44□□□□□ -2.02
NUP170YBL079W YGL036WP53185 909 aaPredicted RBP2.44□□□□□ -2.02
NUP170YBL079W YNL143CP53908 130 aa2.44□□□□□ -2.02
NUP170YBL079W HOS1Q12214 470 aa2.44□□□□□ -2.02
NUP170YBL079W MSB2P32334 1306 aa2.43□□□□□ -2.02
NUP170YBL079W REV1P12689 985 aa2.43□□□□□ -2.02
NUP170YBL079W STE11P23561 717 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms