RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
SCARB2-226ENST00000640916 TBC1D16Q8TBP0 767 aa10.81□□□□□ -0.68
SCARB2-226ENST00000640916 RTF1Q92541 710 aaKnown RBP10.81□□□□□ -0.68
SCARB2-226ENST00000640916 CUL9Q8IWT3 2517 aa10.81□□□□□ -0.68
SCARB2-226ENST00000640916 LAMA3Q16787 3333 aa10.8□□□□□ -0.68
SCARB2-226ENST00000640916 C6orf229H3BNL8 230 aa10.8□□□□□ -0.68
SCARB2-226ENST00000640916 IGF2BP3O00425 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
SCARB2-226ENST00000640916 PROSER3Q2NL68 480 aa10.8□□□□□ -0.68
SCARB2-226ENST00000640916 RSBN1LQ6PCB5 846 aaPredicted RBP10.8□□□□□ -0.68
SCARB2-226ENST00000640916 AGBL3Q8NEM8 1001 aa10.8□□□□□ -0.68
SCARB2-226ENST00000640916 ZNF333Q96JL9 665 aa10.8□□□□□ -0.68
SCARB2-226ENST00000640916 MYOZ2Q9NPC6 264 aa10.8□□□□□ -0.68
SCARB2-226ENST00000640916 CLCN6P51797 869 aa10.79□□□□□ -0.68
SCARB2-226ENST00000640916 NBPF9Q3BBW0 867 aa10.79□□□□□ -0.68
SCARB2-226ENST00000640916 CD99L2Q8TCZ2 262 aa10.79□□□□□ -0.68
SCARB2-226ENST00000640916 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
SCARB2-226ENST00000640916 ALDH1A1P00352 501 aa10.78□□□□□ -0.68
SCARB2-226ENST00000640916 ANXA1P04083 346 aa10.78□□□□□ -0.68
SCARB2-226ENST00000640916 SF3B3Q15393 1217 aaKnown RBP10.78□□□□□ -0.68
SCARB2-226ENST00000640916 ZNF428Q96B54 188 aa10.78□□□□□ -0.68
SCARB2-226ENST00000640916 TRMT112Q9UI30 125 aaKnown RBP10.78□□□□□ -0.68
SCARB2-226ENST00000640916 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
SCARB2-226ENST00000640916 FZD1Q9UP38 647 aa10.78□□□□□ -0.68
SCARB2-226ENST00000640916 ERBB4Q15303 1308 aa10.78□□□□□ -0.68
SCARB2-226ENST00000640916 SH3TC1Q8TE82 1336 aa10.78□□□□□ -0.68
SCARB2-226ENST00000640916 UNC80Q8N2C7 3258 aa10.78□□□□□ -0.68
SCARB2-226ENST00000640916 USP17L8P0C7I0 530 aa10.77□□□□□ -0.69
SCARB2-226ENST00000640916 TCIRG1Q13488 830 aa10.77□□□□□ -0.69
SCARB2-226ENST00000640916 TTLL12Q14166 644 aaPredicted RBP10.77□□□□□ -0.69
SCARB2-226ENST00000640916 ERO1AQ96HE7 468 aa10.77□□□□□ -0.69
SCARB2-226ENST00000640916 EYA3Q99504 573 aa10.77□□□□□ -0.69
SCARB2-226ENST00000640916 PODXL2Q9NZ53 605 aa10.77□□□□□ -0.69
SCARB2-226ENST00000640916 ZSWIM8A7E2V4 1837 aa10.77□□□□□ -0.69
SCARB2-226ENST00000640916 SOX1O00570 391 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-226ENST00000640916 WNT10BO00744 389 aa10.76□□□□□ -0.69
SCARB2-226ENST00000640916 CRHR2Q13324 411 aa10.76□□□□□ -0.69
SCARB2-226ENST00000640916 MS4A3Q96HJ5 214 aa10.76□□□□□ -0.69
SCARB2-226ENST00000640916 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
SCARB2-226ENST00000640916 ZC3H12CQ9C0D7 883 aaKnown RBP10.76□□□□□ -0.69
SCARB2-226ENST00000640916 EFCC1Q9HA90 598 aa10.76□□□□□ -0.69
SCARB2-226ENST00000640916 MANSC4A6NHS7 340 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-226ENST00000640916 WTIPA6NIX2 430 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-226ENST00000640916 GJA5P36382 358 aa10.75□□□□□ -0.69
SCARB2-226ENST00000640916 INHBEP58166 350 aa10.75□□□□□ -0.69
SCARB2-226ENST00000640916 PRKG1Q13976 671 aa10.75□□□□□ -0.69
SCARB2-226ENST00000640916 COPS6Q7L5N1 327 aa10.75□□□□□ -0.69
SCARB2-226ENST00000640916 CLMNQ96JQ2 1002 aa10.75□□□□□ -0.69
SCARB2-226ENST00000640916 PTPN18Q99952 460 aa10.75□□□□□ -0.69
SCARB2-226ENST00000640916 PTCH2Q9Y6C5 1203 aa10.75□□□□□ -0.69
SCARB2-226ENST00000640916 SSC5DA1L4H1 1573 aa10.74□□□□□ -0.69
SCARB2-226ENST00000640916 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
SCARB2-226ENST00000640916 GABBR2O75899 941 aa10.74□□□□□ -0.69
SCARB2-226ENST00000640916 RPS8P62241 208 aaKnown RBP10.74□□□□□ -0.69
SCARB2-226ENST00000640916 SP3Q02447 781 aa10.74□□□□□ -0.69
SCARB2-226ENST00000640916 MAP3K11Q16584 847 aa10.74□□□□□ -0.69
SCARB2-226ENST00000640916 ARMC9Q7Z3E5 817 aa10.74□□□□□ -0.69
SCARB2-226ENST00000640916 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
SCARB2-226ENST00000640916 PNISRQ8TF01 805 aaKnown RBP10.74□□□□□ -0.69
SCARB2-226ENST00000640916 SHISA4Q96DD7 197 aa10.74□□□□□ -0.69
SCARB2-226ENST00000640916 WNK4Q96J92 1243 aa10.74□□□□□ -0.69
SCARB2-226ENST00000640916 MXD3Q9BW11 206 aa10.74□□□□□ -0.69
SCARB2-226ENST00000640916 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-226ENST00000640916 UFL1O94874 794 aa10.73□□□□□ -0.69
SCARB2-226ENST00000640916 U2AF1L5P0DN76 240 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-226ENST00000640916 ZBTB48P10074 688 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-226ENST00000640916 U2AF1Q01081 240 aaKnown RBP eCLIP10.73□□□□□ -0.69
SCARB2-226ENST00000640916 HSP90AB3PQ58FF7 597 aa10.73□□□□□ -0.69
SCARB2-226ENST00000640916 UBE2Q1Q7Z7E8 422 aa10.73□□□□□ -0.69
SCARB2-226ENST00000640916 XAGE3Q8WTP9 111 aa10.73□□□□□ -0.69
SCARB2-226ENST00000640916 FAM89AQ96GI7 184 aa10.73□□□□□ -0.69
SCARB2-226ENST00000640916 ZBED3Q96IU2 234 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-226ENST00000640916 ANGEL1Q9UNK9 670 aaKnown RBP10.73□□□□□ -0.69
SCARB2-226ENST00000640916 TESPA1A2RU30 521 aaPredicted RBP10.72□□□□□ -0.69
SCARB2-226ENST00000640916 USP17L3A6NCW0 530 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 USP17L4A6NCW7 530 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 EIF2S2P20042 333 aaKnown RBP10.72□□□□□ -0.69
SCARB2-226ENST00000640916 NF2P35240 595 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 AIMP1Q12904 312 aaKnown RBP10.72□□□□□ -0.69
SCARB2-226ENST00000640916 SLC4A8Q2Y0W8 1093 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 DACT2Q5SW24 774 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 USP17L1Q7RTZ2 530 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 ZNF467Q7Z7K2 595 aaPredicted RBP10.72□□□□□ -0.69
SCARB2-226ENST00000640916 SLC10A4Q96EP9 437 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 LRCH3Q96II8 777 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 SEC31BQ9NQW1 1179 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 OTOFQ9HC10 1997 aa10.72□□□□□ -0.69
SCARB2-226ENST00000640916 SASH1O94885 1247 aa10.71□□□□□ -0.69
SCARB2-226ENST00000640916 MYCP01106 439 aaPredicted RBP10.71□□□□□ -0.69
SCARB2-226ENST00000640916 CNGB1Q14028 1251 aaPredicted RBP10.71□□□□□ -0.69
SCARB2-226ENST00000640916 SLC9C1Q4G0N8 1177 aa10.71□□□□□ -0.69
SCARB2-226ENST00000640916 GGA1Q9UJY5 639 aa10.71□□□□□ -0.69
SCARB2-226ENST00000640916 PCDHB8Q9UN66 801 aa10.71□□□□□ -0.69
SCARB2-226ENST00000640916 PODNQ7Z5L7 613 aa10.7□□□□□ -0.7
SCARB2-226ENST00000640916 NBPF11Q86T75 865 aa10.7□□□□□ -0.7
SCARB2-226ENST00000640916 SH3TC2Q8TF17 1288 aa10.7□□□□□ -0.7
SCARB2-226ENST00000640916 DPF3Q92784 378 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms