RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 EP400Q96L91 3159 aa17.96■□□□□ 0.47
PAX6-277ENST00000640735 A0A087WZG4 1122 aa17.96■□□□□ 0.47
PAX6-277ENST00000640735 GPR108Q9NPR9 543 aa17.96■□□□□ 0.47
PAX6-277ENST00000640735 ZKSCAN5Q9Y2L8 839 aa17.96■□□□□ 0.47
PAX6-277ENST00000640735 NUP188Q5SRE5 1749 aa17.96■□□□□ 0.47
PAX6-277ENST00000640735 TRIM37O94972 964 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 PDCP20941 246 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 FOXO4P98177 505 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 TOB2Q14106 344 aaPredicted RBP17.95■□□□□ 0.46
PAX6-277ENST00000640735 NECAB1Q8N987 351 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 KAT6BQ8WYB5 2073 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 NBPF26B4DH59 902 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 NBPF14Q5TI25 921 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 NBPF10Q6P3W6 841 aaKnown RBP17.95■□□□□ 0.46
PAX6-277ENST00000640735 ILDR2Q71H61 639 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 NBPF15Q8N660 670 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 RNF214Q8ND24 703 aa17.95■□□□□ 0.46
PAX6-277ENST00000640735 ZNF526Q8TF50 670 aaPredicted RBP17.95■□□□□ 0.46
PAX6-277ENST00000640735 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 DNM1Q05193 864 aaKnown RBP17.94■□□□□ 0.46
PAX6-277ENST00000640735 COL9A3Q14050 684 aaPredicted RBP17.94■□□□□ 0.46
PAX6-277ENST00000640735 PIGBQ92521 554 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 FUCA2Q9BTY2 467 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 FAM117AQ9C073 453 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 SERPINA10Q9UK55 444 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 BTAF1O14981 1849 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 KDM4AO75164 1064 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 PIP4K2AP48426 406 aaPredicted RBP17.94■□□□□ 0.46
PAX6-277ENST00000640735 TERF1P54274 439 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
PAX6-277ENST00000640735 DBNDD2Q9BQY9 259 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 TAF6LQ9Y6J9 622 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
PAX6-277ENST00000640735 TJP1Q07157 1748 aa17.94■□□□□ 0.46
PAX6-277ENST00000640735 ZNF609O15014 1411 aa17.93■□□□□ 0.46
PAX6-277ENST00000640735 ELP1O95163 1332 aa17.93■□□□□ 0.46
PAX6-277ENST00000640735 ATP5J2-PTCD1G3V325 749 aa17.93■□□□□ 0.46
PAX6-277ENST00000640735 FIBPO43427 364 aa17.93■□□□□ 0.46
PAX6-277ENST00000640735 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
PAX6-277ENST00000640735 LARP1BQ659C4 914 aaKnown RBP17.93■□□□□ 0.46
PAX6-277ENST00000640735 EDC3Q96F86 508 aaKnown RBP17.93■□□□□ 0.46
PAX6-277ENST00000640735 PKNOX2Q96KN3 472 aa17.93■□□□□ 0.46
PAX6-277ENST00000640735 KCPQ6ZWJ8 1503 aa17.93■□□□□ 0.46
PAX6-277ENST00000640735 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.92■□□□□ 0.46
PAX6-277ENST00000640735 TNS1Q9HBL0 1735 aaKnown RBP17.92■□□□□ 0.46
PAX6-277ENST00000640735 PALLDQ8WX93 1383 aa17.92■□□□□ 0.46
PAX6-277ENST00000640735 TPM2P07951 284 aa17.92■□□□□ 0.46
PAX6-277ENST00000640735 MCMDC2Q4G0Z9 681 aa17.92■□□□□ 0.46
PAX6-277ENST00000640735 LMBR1LQ6UX01 489 aa17.92■□□□□ 0.46
PAX6-277ENST00000640735 ATG9AQ7Z3C6 839 aa17.92■□□□□ 0.46
PAX6-277ENST00000640735 SH3TC1Q8TE82 1336 aa17.92■□□□□ 0.46
PAX6-277ENST00000640735 FGD1P98174 961 aa17.91■□□□□ 0.46
PAX6-277ENST00000640735 KBTBD3Q8NAB2 608 aa17.91■□□□□ 0.46
PAX6-277ENST00000640735 NEK1Q96PY6 1258 aa17.91■□□□□ 0.46
PAX6-277ENST00000640735 ATG3Q9NT62 314 aa17.91■□□□□ 0.46
PAX6-277ENST00000640735 CWC25Q9NXE8 425 aaPredicted RBP17.91■□□□□ 0.46
PAX6-277ENST00000640735 VPS37CA5D8V6 355 aaPredicted RBP17.9■□□□□ 0.46
PAX6-277ENST00000640735 IL15P40933 162 aaPredicted RBP17.89■□□□□ 0.45
PAX6-277ENST00000640735 KRT85P78386 507 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 CCDC191Q8NCU4 936 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 HELLSQ9NRZ9 838 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 SPEF2Q9C093 1822 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 STK25O00506 426 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 CDC37L1Q7L3B6 337 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 GTF3C6Q969F1 213 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 ASAP1Q9ULH1 1129 aa17.89■□□□□ 0.45
PAX6-277ENST00000640735 CIAO1O76071 339 aa17.88■□□□□ 0.45
PAX6-277ENST00000640735 TTC6Q86TZ1 520 aa17.88■□□□□ 0.45
PAX6-277ENST00000640735 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.87■□□□□ 0.45
PAX6-277ENST00000640735 TCEANC2Q96MN5 208 aa17.87■□□□□ 0.45
PAX6-277ENST00000640735 CYP21A2P08686 494 aa17.87■□□□□ 0.45
PAX6-277ENST00000640735 DNAJC2Q99543 621 aaKnown RBP17.87■□□□□ 0.45
PAX6-277ENST00000640735 DSCC1Q9BVC3 393 aa17.87■□□□□ 0.45
PAX6-277ENST00000640735 PRDM16Q9HAZ2 1276 aa17.87■□□□□ 0.45
PAX6-277ENST00000640735 EYA2O00167 538 aa17.86■□□□□ 0.45
PAX6-277ENST00000640735 APBA3O96018 575 aa17.86■□□□□ 0.45
PAX6-277ENST00000640735 SCAND2PQ9GZW5 306 aaPredicted RBP17.86■□□□□ 0.45
PAX6-277ENST00000640735 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
PAX6-277ENST00000640735 PDE4DQ08499 809 aa17.86■□□□□ 0.45
PAX6-277ENST00000640735 ZMYM1Q5SVZ6 1142 aa17.86■□□□□ 0.45
PAX6-277ENST00000640735 CCDC129Q6ZRS4 1044 aa17.86■□□□□ 0.45
PAX6-277ENST00000640735 SMARCC1Q92922 1105 aaPredicted RBP17.86■□□□□ 0.45
PAX6-277ENST00000640735 SEC62Q99442 399 aaKnown RBP17.86■□□□□ 0.45
PAX6-277ENST00000640735 LLPHQ9BRT6 129 aaKnown RBP17.86■□□□□ 0.45
PAX6-277ENST00000640735 SF3B2Q13435 895 aaKnown RBP17.85■□□□□ 0.45
PAX6-277ENST00000640735 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
PAX6-277ENST00000640735 SMARCC2Q8TAQ2 1214 aa17.85■□□□□ 0.45
PAX6-277ENST00000640735 ARHGEF1Q92888 912 aaKnown RBP17.85■□□□□ 0.45
PAX6-277ENST00000640735 ISCA1Q9BUE6 129 aa17.85■□□□□ 0.45
PAX6-277ENST00000640735 PAG1Q9NWQ8 432 aa17.85■□□□□ 0.45
PAX6-277ENST00000640735 NDUFB9Q9Y6M9 179 aa17.85■□□□□ 0.45
PAX6-277ENST00000640735 LAMA4Q16363 1823 aa17.85■□□□□ 0.45
PAX6-277ENST00000640735 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
PAX6-277ENST00000640735 UNCXA6NJT0 531 aa17.84■□□□□ 0.45
PAX6-277ENST00000640735 DTNBO60941 627 aa17.84■□□□□ 0.45
PAX6-277ENST00000640735 A1BGP04217 495 aa17.84■□□□□ 0.45
PAX6-277ENST00000640735 GIMAP6Q6P9H5 292 aa17.84■□□□□ 0.45
PAX6-277ENST00000640735 Q6ZUG5 572 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms