RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 TTC41PQ6P2S7 1318 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 NUP153P49790 1475 aaKnown RBP9.38□□□□□ -0.91
NECAP1-227ENST00000640648 CCDC69A6NI79 296 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 STX6O43752 255 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-227ENST00000640648 YY1P25490 414 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 GIMAP6Q6P9H5 292 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 ZGPATQ8N5A5 531 aaKnown RBP9.38□□□□□ -0.91
NECAP1-227ENST00000640648 NPHP3Q7Z494 1330 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 ANXA1P04083 346 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 VAV2P52735 878 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 SMARCC2Q8TAQ2 1214 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 RAB3IPQ96QF0 476 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-227ENST00000640648 PYM1Q9BRP8 204 aaKnown RBP9.38□□□□□ -0.91
NECAP1-227ENST00000640648 TAOK3Q9H2K8 898 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 ANTXR1Q9H6X2 564 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 CAPN7Q9Y6W3 813 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 PCK1P35558 622 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 PHLDB2Q86SQ0 1253 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 SDCCAG8Q86SQ7 713 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-227ENST00000640648 UBA5Q9GZZ9 404 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 HYPKQ9NX55 129 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 TRMT1Q9NXH9 659 aaKnown RBP9.38□□□□□ -0.91
NECAP1-227ENST00000640648 IL16Q14005 1332 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 YEATS4O95619 227 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 GJB2P29033 226 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 LMNB2Q03252 620 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 SART3Q15020 963 aaKnown RBP9.37□□□□□ -0.91
NECAP1-227ENST00000640648 KRT24Q2M2I5 525 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 RUFY4Q6ZNE9 571 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 ATRIPQ8WXE1 791 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 GBP5Q96PP8 586 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 MXRA7P84157 204 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 TCEANC2Q96MN5 208 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 GDAP1L1Q96MZ0 367 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 IRAK4Q9NWZ3 460 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 MYCNP04198 464 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-227ENST00000640648 IRX4P78413 519 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 SWT1Q5T5J6 900 aaKnown RBP9.37□□□□□ -0.91
NECAP1-227ENST00000640648 IQCA1Q86XH1 822 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 CNNM1Q9NRU3 951 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 ZBTB40Q9NUA8 1239 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 LMBRD1Q9NUN5 540 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 PAIP2BQ9ULR5 123 aaKnown RBP9.37□□□□□ -0.91
NECAP1-227ENST00000640648 PHLPP2Q6ZVD8 1323 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 CDKL5O76039 1030 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 XBP1P17861 261 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 SPA17Q15506 151 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
NECAP1-227ENST00000640648 EIF3CLB5ME19 914 aaKnown RBP9.36□□□□□ -0.91
NECAP1-227ENST00000640648 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-227ENST00000640648 ELF1P32519 619 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 RASSF2P50749 326 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 PDE1AP54750 535 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 SEPT7Q16181 437 aaKnown RBP9.36□□□□□ -0.91
NECAP1-227ENST00000640648 ANKRD27Q96NW4 1050 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 TSC22D3Q99576 134 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 EIF3CQ99613 913 aaKnown RBP9.36□□□□□ -0.91
NECAP1-227ENST00000640648 TCOF1Q13428 1488 aaKnown RBP9.36□□□□□ -0.91
NECAP1-227ENST00000640648 WASLO00401 505 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-227ENST00000640648 PTGS1P23219 599 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 PPP1R42Q7Z4L9 355 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 AMOTL1Q8IY63 956 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 POLR3AO14802 1390 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-227ENST00000640648 PZPP20742 1482 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 CFAP43Q8NDM7 1665 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 ADGRL1O94910 1474 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 PFDN1O60925 122 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 SMIM24O75264 130 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 ATF3P18847 181 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 TMC6Q7Z403 805 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 ARHGAP24Q8N264 748 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 MRPL50Q8N5N7 158 aaKnown RBP9.36□□□□□ -0.91
NECAP1-227ENST00000640648 NECAB1Q8N987 351 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 MRFAP1L1Q96HT8 127 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 RABGAP1Q9Y3P9 1069 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 TYRO3Q06418 890 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 SPAG1Q07617 926 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 SPECC1Q5M775 1068 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 TEX14Q8IWB6 1497 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 NSD2O96028 1365 aa9.36□□□□□ -0.91
NECAP1-227ENST00000640648 ZNF75DP51815 510 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 ZC3H6P61129 1189 aaKnown RBP9.35□□□□□ -0.91
NECAP1-227ENST00000640648 MPRIPQ6WCQ1 1025 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 CCDC155Q8N6L0 562 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 MIS12Q9H081 205 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 PPP1R1BQ9UD71 204 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-227ENST00000640648 CNPY2Q9Y2B0 182 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 CTIFO43310 598 aaKnown RBP9.35□□□□□ -0.91
NECAP1-227ENST00000640648 CHMP4BP1P59074 171 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 ANKRD44Q8N8A2 993 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 ZRANB1Q9UGI0 708 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 TTF2Q9UNY4 1162 aaKnown RBP9.35□□□□□ -0.91
NECAP1-227ENST00000640648 FAN1Q9Y2M0 1017 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 CABP4P57796 275 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 CCT2P78371 535 aaKnown RBP9.35□□□□□ -0.91
NECAP1-227ENST00000640648 CPLX4Q7Z7G2 160 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 NEK11Q8NG66 645 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
NECAP1-227ENST00000640648 CEP126Q9P2H0 1117 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms