RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 KBTBD3Q8NAB2 608 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 NYXQ9GZU5 481 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 FKBP15Q5T1M5 1219 aa20.22■□□□□ 0.83
SCARB2-223ENST00000640640 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
SCARB2-223ENST00000640640 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
SCARB2-223ENST00000640640 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
SCARB2-223ENST00000640640 URI1O94763 535 aaPredicted RBP20.22■□□□□ 0.83
SCARB2-223ENST00000640640 PDCL2Q8N4E4 241 aa20.22■□□□□ 0.83
SCARB2-223ENST00000640640 DNAJC25Q9H1X3 360 aa20.22■□□□□ 0.83
SCARB2-223ENST00000640640 MYO6Q9UM54 1294 aa20.22■□□□□ 0.83
SCARB2-223ENST00000640640 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
SCARB2-223ENST00000640640 ABCC3O15438 1527 aa20.21■□□□□ 0.83
SCARB2-223ENST00000640640 TSPY3P0CV98 308 aa20.21■□□□□ 0.83
SCARB2-223ENST00000640640 TSPY8P0CW00 308 aa20.21■□□□□ 0.83
SCARB2-223ENST00000640640 IDEP14735 1019 aa20.21■□□□□ 0.83
SCARB2-223ENST00000640640 PYM1Q9BRP8 204 aaKnown RBP20.21■□□□□ 0.83
SCARB2-223ENST00000640640 USP6P35125 1406 aa20.21■□□□□ 0.83
SCARB2-223ENST00000640640 BMP15O95972 392 aa20.21■□□□□ 0.83
SCARB2-223ENST00000640640 HLA-DOAP06340 250 aa20.21■□□□□ 0.83
SCARB2-223ENST00000640640 PHKG2P15735 406 aa20.2■□□□□ 0.82
SCARB2-223ENST00000640640 HSPA4P34932 840 aa20.2■□□□□ 0.82
SCARB2-223ENST00000640640 XAGE2Q96GT9 111 aa20.2■□□□□ 0.82
SCARB2-223ENST00000640640 NDUFB9Q9Y6M9 179 aa20.2■□□□□ 0.82
SCARB2-223ENST00000640640 BEND3Q5T5X7 828 aa20.2■□□□□ 0.82
SCARB2-223ENST00000640640 TYRO3Q06418 890 aa20.2■□□□□ 0.82
SCARB2-223ENST00000640640 AXDND1Q5T1B0 1012 aaPredicted RBP20.2■□□□□ 0.82
SCARB2-223ENST00000640640 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCARB2-223ENST00000640640 CALML4Q96GE6 196 aa20.2■□□□□ 0.82
SCARB2-223ENST00000640640 NSFL1CQ9UNZ2 370 aaKnown RBP20.19■□□□□ 0.82
SCARB2-223ENST00000640640 ZNF853P0CG23 659 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 GNAQP50148 359 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 APPBP2Q92624 585 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 TSG101Q99816 390 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 RXRAP19793 462 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 PARP10Q53GL7 1025 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 NUP88Q99567 741 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-223ENST00000640640 CDCA7Q9BWT1 371 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-223ENST00000640640 NLRP1Q9C000 1473 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 PPP1R12BO60237 982 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-223ENST00000640640 KIF5CO60282 957 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 PDE8AO60658 829 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 MBD4O95243 580 aa20.19■□□□□ 0.82
SCARB2-223ENST00000640640 ZNF830Q96NB3 372 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-223ENST00000640640 RRP9O43818 475 aaKnown RBP20.18■□□□□ 0.82
SCARB2-223ENST00000640640 AMPD3Q01432 767 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 SPA17Q15506 151 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 CCDC186Q7Z3E2 898 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 CACNA2D4Q7Z3S7 1137 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 FGFR1OPO95684 399 aaKnown RBP20.18■□□□□ 0.82
SCARB2-223ENST00000640640 CLCN1P35523 988 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 KIF4BQ2VIQ3 1234 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 CCDC178Q5BJE1 867 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 CUL5Q93034 780 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 ARAP3Q8WWN8 1544 aa20.18■□□□□ 0.82
SCARB2-223ENST00000640640 SETQ01105 290 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-223ENST00000640640 SEPT11Q9NVA2 429 aaKnown RBP20.17■□□□□ 0.82
SCARB2-223ENST00000640640 MCM9Q9NXL9 1143 aa20.17■□□□□ 0.82
SCARB2-223ENST00000640640 TRIM75PA6NK02 468 aa20.17■□□□□ 0.82
SCARB2-223ENST00000640640 PUM3Q15397 648 aaKnown RBP20.17■□□□□ 0.82
SCARB2-223ENST00000640640 BRAPQ7Z569 592 aa20.17■□□□□ 0.82
SCARB2-223ENST00000640640 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
SCARB2-223ENST00000640640 EAF2Q96CJ1 260 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-223ENST00000640640 ARHGAP31Q2M1Z3 1444 aa20.17■□□□□ 0.82
SCARB2-223ENST00000640640 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
SCARB2-223ENST00000640640 UBA5Q9GZZ9 404 aa20.17■□□□□ 0.82
SCARB2-223ENST00000640640 PRM3Q9NNZ6 103 aa20.17■□□□□ 0.82
SCARB2-223ENST00000640640 AFMP43652 599 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 KIF20AO95235 890 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 PRKCSHP14314 528 aaPredicted RBP20.16■□□□□ 0.82
SCARB2-223ENST00000640640 TNIP1Q15025 636 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 CCDC148Q8NFR7 591 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 BCORL1Q5H9F3 1711 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 GPAA1O43292 621 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 ATP5JP18859 108 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 MTIF2P46199 727 aaKnown RBP20.16■□□□□ 0.82
SCARB2-223ENST00000640640 UBASH3AP57075 661 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 IQCEQ6IPM2 695 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 EDC3Q96F86 508 aaKnown RBP20.16■□□□□ 0.82
SCARB2-223ENST00000640640 ZKSCAN5Q9Y2L8 839 aa20.16■□□□□ 0.82
SCARB2-223ENST00000640640 TRPM1Q7Z4N2 1603 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 FAM173BQ6P4H8 233 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 ZNF804AQ7Z570 1209 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 AOPEPQ8N6M6 819 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 CALM1P0DP23 149 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 CALM2P0DP24 149 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 CALM3P0DP25 149 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 CABP5Q9NP86 173 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 MAP3K4Q9Y6R4 1608 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 F8W031 263 aaPredicted RBP20.15■□□□□ 0.82
SCARB2-223ENST00000640640 EIF3JO75822 258 aaKnown RBP20.15■□□□□ 0.82
SCARB2-223ENST00000640640 YEATS4O95619 227 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 TTC12Q9H892 705 aaPredicted RBP20.15■□□□□ 0.82
SCARB2-223ENST00000640640 KDRP35968 1356 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 IBTKQ9P2D0 1353 aaPredicted RBP20.15■□□□□ 0.82
SCARB2-223ENST00000640640 SKIDA1Q1XH10 827 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
SCARB2-223ENST00000640640 B4E1Z4 1266 aa20.14■□□□□ 0.82
SCARB2-223ENST00000640640 ANKRD2Q9GZV1 360 aa20.14■□□□□ 0.82
SCARB2-223ENST00000640640 LMTK3Q96Q04 1460 aa20.14■□□□□ 0.81
SCARB2-223ENST00000640640 HSP90AA4PQ58FG1 418 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms