RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 C16orf71Q8IYS4 520 aaPredicted RBP20.9■□□□□ 0.94
KCNMA1-278ENST00000640141 DACT1Q9NYF0 836 aa20.9■□□□□ 0.94
KCNMA1-278ENST00000640141 UBE4AQ14139 1066 aa20.9■□□□□ 0.94
KCNMA1-278ENST00000640141 ANKRD2Q9GZV1 360 aa20.9■□□□□ 0.94
KCNMA1-278ENST00000640141 SPTLC2O15270 562 aa20.9■□□□□ 0.94
KCNMA1-278ENST00000640141 DDX12PQ92771 950 aa20.9■□□□□ 0.94
KCNMA1-278ENST00000640141 POLR3GO15318 223 aaPredicted RBP20.89■□□□□ 0.94
KCNMA1-278ENST00000640141 MARCKSP29966 332 aaPredicted RBP20.89■□□□□ 0.94
KCNMA1-278ENST00000640141 CBX1P83916 185 aa20.89■□□□□ 0.94
KCNMA1-278ENST00000640141 BBXQ8WY36 941 aaPredicted RBP20.89■□□□□ 0.94
KCNMA1-278ENST00000640141 GTPBP4Q9BZE4 634 aaKnown RBP20.89■□□□□ 0.94
KCNMA1-278ENST00000640141 RRP36Q96EU6 259 aaKnown RBP20.89■□□□□ 0.93
KCNMA1-278ENST00000640141 ZFYVE9O95405 1425 aa20.89■□□□□ 0.93
KCNMA1-278ENST00000640141 RAPGEF6Q8TEU7 1601 aa20.89■□□□□ 0.93
KCNMA1-278ENST00000640141 RAD50Q92878 1312 aa20.89■□□□□ 0.93
KCNMA1-278ENST00000640141 MAATS1Q7Z4T9 603 aa20.89■□□□□ 0.93
KCNMA1-278ENST00000640141 FAM107BQ9H098 131 aa20.89■□□□□ 0.93
KCNMA1-278ENST00000640141 MCM9Q9NXL9 1143 aa20.89■□□□□ 0.93
KCNMA1-278ENST00000640141 B4DLN1 442 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 GCP02774 474 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 MRPL12P52815 198 aaKnown RBP20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 CWF19L2Q2TBE0 894 aaKnown RBP20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 KRT79Q5XKE5 535 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 C8orf37Q96NL8 207 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 PHACTR2O75167 634 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 EYA1Q99502 592 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 HOMER2Q9NSB8 354 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 SPDYE3A6NKU9 549 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 PRIMPOLQ96LW4 560 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 NSFL1CQ9UNZ2 370 aaKnown RBP20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
KCNMA1-278ENST00000640141 CABLES1Q8TDN4 633 aa20.87■□□□□ 0.93
KCNMA1-278ENST00000640141 DNM1Q05193 864 aaKnown RBP20.87■□□□□ 0.93
KCNMA1-278ENST00000640141 SYNCQ9H7C4 482 aa20.87■□□□□ 0.93
KCNMA1-278ENST00000640141 COMMD10Q9Y6G5 202 aa20.87■□□□□ 0.93
KCNMA1-278ENST00000640141 NF2P35240 595 aa20.87■□□□□ 0.93
KCNMA1-278ENST00000640141 CREB3L3Q68CJ9 461 aa20.87■□□□□ 0.93
KCNMA1-278ENST00000640141 DHX32Q7L7V1 743 aaKnown RBP20.87■□□□□ 0.93
KCNMA1-278ENST00000640141 MAGEB6Q8N7X4 407 aa20.87■□□□□ 0.93
KCNMA1-278ENST00000640141 SPDYE4A6NLX3 237 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 SKILP12757 684 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 PRPHP41219 470 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 TFCP2Q12800 502 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 KRT2P35908 639 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 BMS1Q14692 1282 aaKnown RBP20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 TSPYL6Q8N831 410 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 DHX58Q96C10 678 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 EYA3Q99504 573 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 UGGT2Q9NYU1 1516 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 GNA11P29992 359 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 RTL1A6NKG5 1358 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 SBNO2Q9Y2G9 1366 aa20.86■□□□□ 0.93
KCNMA1-278ENST00000640141 RNF187Q5TA31 235 aaPredicted RBP20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 AOPEPQ8N6M6 819 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 IKBKGQ9Y6K9 419 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 PCDH11XQ9BZA7 1347 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 PCDH11YQ9BZA8 1340 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 SYCP2Q9BX26 1530 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 RNMTO43148 476 aaKnown RBP20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 CEP112Q8N8E3 955 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 ZSWIM4Q9H7M6 989 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 LDHBP07195 334 aaKnown RBP20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 HELBQ8NG08 1087 aaPredicted RBP20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 SELENOOQ9BVL4 669 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 IMPG2Q9BZV3 1241 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 TRPM2O94759 1503 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 BRAPQ7Z569 592 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 IP6K1Q92551 441 aa20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 DDX21Q9NR30 783 aaKnown RBP eCLIP20.85■□□□□ 0.93
KCNMA1-278ENST00000640141 GIGYF2Q6Y7W6 1299 aaKnown RBP20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 PARP3Q9Y6F1 533 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 AK2P54819 239 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 SPECC1LQ69YQ0 1117 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 MIGA1Q8NAN2 632 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 TTC12Q9H892 705 aaPredicted RBP20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 ABCC1P33527 1531 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 TSNARE1Q96NA8 513 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 DNAJC25Q9H1X3 360 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
KCNMA1-278ENST00000640141 CTAGE15A4D2H0 777 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 CTAGE8P0CG41 777 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 CCDC186Q7Z3E2 898 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 CTAGE6Q86UF2 777 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 CTAGE4Q8IX94 777 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 TACC1O75410 805 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 TNNI2P48788 182 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 VEZTQ9HBM0 779 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 PIK3C2GO75747 1445 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 BICDL2A1A5D9 508 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 TUBB4AP04350 444 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 HOXC9P31274 260 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 LMAN1P49257 510 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 APOBRQ0VD83 1088 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 CCDC155Q8N6L0 562 aa20.83■□□□□ 0.93
KCNMA1-278ENST00000640141 HSP90AA4PQ58FG1 418 aa20.83■□□□□ 0.92
KCNMA1-278ENST00000640141 TCHPQ9BT92 498 aa20.83■□□□□ 0.92
KCNMA1-278ENST00000640141 HSF2BPO75031 334 aa20.82■□□□□ 0.92
KCNMA1-278ENST00000640141 SMC5Q8IY18 1101 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms