RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 ISCA1Q9BUE6 129 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 DDX11L8A8MPP1 907 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 PRELPP51888 382 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 CRY2Q49AN0 593 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 ERFEQ4G0M1 354 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 SNX14Q9Y5W7 946 aa16.7■□□□□ 0.26
ATRIP-208ENST00000639561 NTSR2O95665 410 aa16.69■□□□□ 0.26
ATRIP-208ENST00000639561 PTH1RQ03431 593 aa16.69■□□□□ 0.26
ATRIP-208ENST00000639561 FAM227BQ96M60 508 aa16.69■□□□□ 0.26
ATRIP-208ENST00000639561 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
ATRIP-208ENST00000639561 HSPA6P17066 643 aa16.69■□□□□ 0.26
ATRIP-208ENST00000639561 MCM2P49736 904 aa16.69■□□□□ 0.26
ATRIP-208ENST00000639561 KIAA1211Q6ZU35 1233 aa16.69■□□□□ 0.26
ATRIP-208ENST00000639561 RUFY2Q8WXA3 655 aa16.69■□□□□ 0.26
ATRIP-208ENST00000639561 RPGRQ92834 1020 aaKnown RBP16.69■□□□□ 0.26
ATRIP-208ENST00000639561 GBP4Q96PP9 640 aa16.69■□□□□ 0.26
ATRIP-208ENST00000639561 GLTPD2A6NH11 291 aa16.68■□□□□ 0.26
ATRIP-208ENST00000639561 TRAK2O60296 914 aa16.68■□□□□ 0.26
ATRIP-208ENST00000639561 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
ATRIP-208ENST00000639561 ATG9AQ7Z3C6 839 aa16.68■□□□□ 0.26
ATRIP-208ENST00000639561 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
ATRIP-208ENST00000639561 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
ATRIP-208ENST00000639561 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
ATRIP-208ENST00000639561 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
ATRIP-208ENST00000639561 EDC3Q96F86 508 aaKnown RBP16.67■□□□□ 0.26
ATRIP-208ENST00000639561 CWC22Q9HCG8 908 aaKnown RBP16.67■□□□□ 0.26
ATRIP-208ENST00000639561 NMIQ13287 307 aaPredicted RBP16.67■□□□□ 0.26
ATRIP-208ENST00000639561 DPY19L2Q6NUT2 758 aa16.67■□□□□ 0.26
ATRIP-208ENST00000639561 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
ATRIP-208ENST00000639561 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
ATRIP-208ENST00000639561 WDR90Q96KV7 1748 aa16.67■□□□□ 0.26
ATRIP-208ENST00000639561 ATP5JP18859 108 aa16.66■□□□□ 0.26
ATRIP-208ENST00000639561 CUL4AQ13619 759 aa16.66■□□□□ 0.26
ATRIP-208ENST00000639561 CLEC17AQ6ZS10 378 aa16.66■□□□□ 0.26
ATRIP-208ENST00000639561 RRAGCQ9HB90 399 aa16.66■□□□□ 0.26
ATRIP-208ENST00000639561 A0A0D9SFI3 127 aa16.66■□□□□ 0.26
ATRIP-208ENST00000639561 HOXA10P31260 410 aaPredicted RBP16.66■□□□□ 0.26
ATRIP-208ENST00000639561 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATRIP-208ENST00000639561 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
ATRIP-208ENST00000639561 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
ATRIP-208ENST00000639561 FSD1Q9BTV5 496 aa16.66■□□□□ 0.26
ATRIP-208ENST00000639561 NDUFB9Q9Y6M9 179 aa16.66■□□□□ 0.26
ATRIP-208ENST00000639561 NUCB2P80303 420 aa16.65■□□□□ 0.26
ATRIP-208ENST00000639561 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
ATRIP-208ENST00000639561 NLRP3Q96P20 1036 aa16.65■□□□□ 0.26
ATRIP-208ENST00000639561 SNRKQ9NRH2 765 aa16.65■□□□□ 0.26
ATRIP-208ENST00000639561 LAMB2P55268 1798 aa16.65■□□□□ 0.26
ATRIP-208ENST00000639561 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
ATRIP-208ENST00000639561 HIP1O00291 1037 aa16.65■□□□□ 0.26
ATRIP-208ENST00000639561 GRIPAP1Q4V328 841 aa16.65■□□□□ 0.26
ATRIP-208ENST00000639561 SLC10A5Q5PT55 438 aa16.65■□□□□ 0.26
ATRIP-208ENST00000639561 ZNF594Q96JF6 807 aaPredicted RBP16.65■□□□□ 0.26
ATRIP-208ENST00000639561 FSTL1Q12841 308 aa16.64■□□□□ 0.25
ATRIP-208ENST00000639561 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
ATRIP-208ENST00000639561 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
ATRIP-208ENST00000639561 TTC14Q96N46 770 aa16.64■□□□□ 0.25
ATRIP-208ENST00000639561 CRAMP1Q96RY5 1269 aa16.64■□□□□ 0.25
ATRIP-208ENST00000639561 ZDHHC9Q9Y397 364 aa16.64■□□□□ 0.25
ATRIP-208ENST00000639561 BAG4O95429 457 aaKnown RBP16.64■□□□□ 0.25
ATRIP-208ENST00000639561 VEGFAP15692 232 aaPredicted RBP16.64■□□□□ 0.25
ATRIP-208ENST00000639561 FAM89AQ96GI7 184 aa16.64■□□□□ 0.25
ATRIP-208ENST00000639561 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
ATRIP-208ENST00000639561 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
ATRIP-208ENST00000639561 EYA2O00167 538 aa16.63■□□□□ 0.25
ATRIP-208ENST00000639561 IL15P40933 162 aaPredicted RBP16.63■□□□□ 0.25
ATRIP-208ENST00000639561 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
ATRIP-208ENST00000639561 KCNB2Q92953 911 aa16.63■□□□□ 0.25
ATRIP-208ENST00000639561 PCCAP05165 728 aaPredicted RBP16.62■□□□□ 0.25
ATRIP-208ENST00000639561 CPA1P15085 419 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 APLP1P51693 650 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 ADCK5Q3MIX3 580 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 ZNF589Q86UQ0 364 aaPredicted RBP16.62■□□□□ 0.25
ATRIP-208ENST00000639561 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 PUS3Q9BZE2 481 aaKnown RBP16.62■□□□□ 0.25
ATRIP-208ENST00000639561 TRMT112Q9UI30 125 aaKnown RBP16.62■□□□□ 0.25
ATRIP-208ENST00000639561 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 CHGBP05060 677 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 SYNE4Q8N205 404 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
ATRIP-208ENST00000639561 PSMD1Q99460 953 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 HAUS7Q99871 368 aa16.62■□□□□ 0.25
ATRIP-208ENST00000639561 RBM8AQ9Y5S9 174 aaKnown RBP16.62■□□□□ 0.25
ATRIP-208ENST00000639561 PPEF1O14829 653 aaPredicted RBP16.61■□□□□ 0.25
ATRIP-208ENST00000639561 ZNF609O15014 1411 aa16.61■□□□□ 0.25
ATRIP-208ENST00000639561 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
ATRIP-208ENST00000639561 TIMM10P62072 90 aa16.61■□□□□ 0.25
ATRIP-208ENST00000639561 ZBTB38Q8NAP3 1195 aaPredicted RBP16.61■□□□□ 0.25
ATRIP-208ENST00000639561 SMC1BQ8NDV3 1235 aa16.61■□□□□ 0.25
ATRIP-208ENST00000639561 SNED1Q8TER0 1413 aa16.61■□□□□ 0.25
ATRIP-208ENST00000639561 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
ATRIP-208ENST00000639561 TMX4Q9H1E5 349 aaPredicted RBP16.61■□□□□ 0.25
ATRIP-208ENST00000639561 GPR108Q9NPR9 543 aa16.61■□□□□ 0.25
ATRIP-208ENST00000639561 CIAO1O76071 339 aa16.6■□□□□ 0.25
ATRIP-208ENST00000639561 AK2P54819 239 aa16.6■□□□□ 0.25
ATRIP-208ENST00000639561 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
ATRIP-208ENST00000639561 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
ATRIP-208ENST00000639561 CCDC85AQ96PX6 553 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms