RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 A0A0G2JLW4 131 aa13.08□□□□□ -0.31
PAX6-257ENST00000639409 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.31
PAX6-257ENST00000639409 ITPK1Q13572 414 aa13.08□□□□□ -0.31
PAX6-257ENST00000639409 TOB2Q14106 344 aaPredicted RBP13.08□□□□□ -0.31
PAX6-257ENST00000639409 BLOC1S2Q6QNY1 142 aa13.08□□□□□ -0.31
PAX6-257ENST00000639409 CDCA7Q9BWT1 371 aaPredicted RBP13.08□□□□□ -0.31
PAX6-257ENST00000639409 RREB1Q92766 1687 aa13.08□□□□□ -0.32
PAX6-257ENST00000639409 SYT1P21579 422 aa13.08□□□□□ -0.32
PAX6-257ENST00000639409 RPS6KB1P23443 525 aa13.08□□□□□ -0.32
PAX6-257ENST00000639409 ATP6V1AP38606 617 aa13.08□□□□□ -0.32
PAX6-257ENST00000639409 FKBP4Q02790 459 aaKnown RBP eCLIP13.08□□□□□ -0.32
PAX6-257ENST00000639409 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
PAX6-257ENST00000639409 HMG20BQ9P0W2 317 aa13.08□□□□□ -0.32
PAX6-257ENST00000639409 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.08□□□□□ -0.32
PAX6-257ENST00000639409 MAST3O60307 1309 aa13.08□□□□□ -0.32
PAX6-257ENST00000639409 WDR33Q9C0J8 1336 aaKnown RBP13.08□□□□□ -0.32
PAX6-257ENST00000639409 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 KCNQ2O43526 872 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 PSMA5P28066 241 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 GJB2P29033 226 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
PAX6-257ENST00000639409 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
PAX6-257ENST00000639409 FAM177A1Q8N128 213 aaPredicted RBP13.07□□□□□ -0.32
PAX6-257ENST00000639409 SMC3Q9UQE7 1217 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 RIPOR2Q9Y4F9 1068 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 EP400Q96L91 3159 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 MYO5AQ9Y4I1 1855 aaKnown RBP13.07□□□□□ -0.32
PAX6-257ENST00000639409 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 MRE11P49959 708 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 SIK1P57059 783 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 TSGA10IPQ3SY00 556 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 STOX1Q6ZVD7 989 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 ZNF34Q8IZ26 560 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 LRP5O75197 1615 aa13.07□□□□□ -0.32
PAX6-257ENST00000639409 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 ERVV-1B6SEH8 477 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 M0R2C6 588 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 STX6O43752 255 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 SH2B1Q9NRF2 756 aaPredicted RBP13.06□□□□□ -0.32
PAX6-257ENST00000639409 MYH7P12883 1935 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
PAX6-257ENST00000639409 DDX60Q8IY21 1712 aaKnown RBP13.06□□□□□ -0.32
PAX6-257ENST00000639409 CICQ96RK0 1608 aaPredicted RBP13.06□□□□□ -0.32
PAX6-257ENST00000639409 METTL24Q5JXM2 366 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 TMEM63CQ9P1W3 806 aa13.06□□□□□ -0.32
PAX6-257ENST00000639409 ZSCAN22P10073 491 aaPredicted RBP13.05□□□□□ -0.32
PAX6-257ENST00000639409 CCDC158Q5M9N0 1113 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 GORABQ5T7V8 394 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 VGLL2Q8N8G2 317 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 ZSCAN31Q96LW9 406 aaPredicted RBP13.05□□□□□ -0.32
PAX6-257ENST00000639409 HELLSQ9NRZ9 838 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 AKAP2Q9Y2D5 859 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 U3KPZ7 1027 aaPredicted RBP13.05□□□□□ -0.32
PAX6-257ENST00000639409 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 PDE8AO60658 829 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 ZAP70P43403 619 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 STK3Q13188 491 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 SUSD4Q5VX71 490 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.05□□□□□ -0.32
PAX6-257ENST00000639409 OSBP2Q969R2 916 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 LRRC2Q9BYS8 371 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 TMEM51Q9NW97 253 aa13.05□□□□□ -0.32
PAX6-257ENST00000639409 RNF113AO15541 343 aaKnown RBP13.04□□□□□ -0.32
PAX6-257ENST00000639409 GADD45BO75293 160 aaPredicted RBP13.04□□□□□ -0.32
PAX6-257ENST00000639409 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
PAX6-257ENST00000639409 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
PAX6-257ENST00000639409 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
PAX6-257ENST00000639409 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 NEK1Q96PY6 1258 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 COL4A1P02462 1669 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 FOXP2O15409 715 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 F13A1P00488 732 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 MCAMP43121 646 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 ISY1Q9ULR0 285 aaKnown RBP13.04□□□□□ -0.32
PAX6-257ENST00000639409 MTMR6Q9Y217 621 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 CNPY2Q9Y2B0 182 aa13.04□□□□□ -0.32
PAX6-257ENST00000639409 CAMTA2O94983 1202 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 KCNQ4P56696 695 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 ZNF445P59923 1031 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 KRT32Q14532 448 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 TTLL5Q6EMB2 1281 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 Q6ZUG5 572 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 DSCC1Q9BVC3 393 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 ALDH8A1Q9H2A2 487 aaPredicted RBP13.03□□□□□ -0.32
PAX6-257ENST00000639409 BCORQ6W2J9 1755 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 BCL9LQ86UU0 1499 aa13.03□□□□□ -0.32
PAX6-257ENST00000639409 SNAP23O00161 211 aa13.02□□□□□ -0.32
PAX6-257ENST00000639409 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.32
PAX6-257ENST00000639409 USP48Q86UV5 1035 aa13.02□□□□□ -0.32
PAX6-257ENST00000639409 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.32
PAX6-257ENST00000639409 C8orf37Q96NL8 207 aa13.02□□□□□ -0.32
PAX6-257ENST00000639409 ARAP2Q8WZ64 1704 aa13.02□□□□□ -0.32
PAX6-257ENST00000639409 VPS37CA5D8V6 355 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms