RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 OSBP2Q969R2 916 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 C16orf45Q96MC5 204 aaPredicted RBP12.07□□□□□ -0.48
PAX6-244ENST00000638913 CFAP45Q9UL16 551 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 MRC1P22897 1456 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
PAX6-244ENST00000638913 ME1P48163 572 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 CCDC144BQ3MJ40 725 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 ZMYM1Q5SVZ6 1142 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 CCDC144CPQ8IYA2 1237 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 SYNE4Q8N205 404 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 PRIMPOLQ96LW4 560 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 ZSCAN16Q9H4T2 348 aaPredicted RBP12.07□□□□□ -0.48
PAX6-244ENST00000638913 PRDM10Q9NQV6 1147 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.48
PAX6-244ENST00000638913 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 SH3TC1Q8TE82 1336 aa12.07□□□□□ -0.48
PAX6-244ENST00000638913 EYA2O00167 538 aa12.06□□□□□ -0.48
PAX6-244ENST00000638913 RNF113AO15541 343 aaKnown RBP12.06□□□□□ -0.48
PAX6-244ENST00000638913 POLR3DP05423 398 aaPredicted RBP12.06□□□□□ -0.48
PAX6-244ENST00000638913 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
PAX6-244ENST00000638913 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
PAX6-244ENST00000638913 KIF3AQ9Y496 699 aa12.06□□□□□ -0.48
PAX6-244ENST00000638913 PDIA4P13667 645 aaKnown RBP12.06□□□□□ -0.48
PAX6-244ENST00000638913 IL15P40933 162 aaPredicted RBP12.06□□□□□ -0.48
PAX6-244ENST00000638913 SCARF1Q14162 830 aa12.06□□□□□ -0.48
PAX6-244ENST00000638913 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
PAX6-244ENST00000638913 FAM89AQ96GI7 184 aa12.06□□□□□ -0.48
PAX6-244ENST00000638913 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
PAX6-244ENST00000638913 ZSCAN25Q6NSZ9 544 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 RBM43Q6ZSC3 357 aaKnown RBP12.05□□□□□ -0.48
PAX6-244ENST00000638913 PLA2G4DQ86XP0 818 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 FSIP1Q8NA03 581 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 CACTINQ8WUQ7 758 aaKnown RBP12.05□□□□□ -0.48
PAX6-244ENST00000638913 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 A0A1B0GVL5 298 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 GOLGA6L19H0YKK7 550 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 HMGB1P09429 215 aaKnown RBP12.05□□□□□ -0.48
PAX6-244ENST00000638913 TTC39AQ5SRH9 613 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 TDRD7Q8NHU6 1098 aaKnown RBP12.05□□□□□ -0.48
PAX6-244ENST00000638913 ZCRB1Q8TBF4 217 aaKnown RBP12.05□□□□□ -0.48
PAX6-244ENST00000638913 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 DSCC1Q9BVC3 393 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 STRN4Q9NRL3 753 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 CEP126Q9P2H0 1117 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 DENND2AQ9ULE3 1009 aa12.05□□□□□ -0.48
PAX6-244ENST00000638913 FDPSP14324 419 aaKnown RBP12.04□□□□□ -0.48
PAX6-244ENST00000638913 SNW1Q13573 536 aaKnown RBP12.04□□□□□ -0.48
PAX6-244ENST00000638913 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
PAX6-244ENST00000638913 TPM3P06753 285 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 CHAF1AQ13111 956 aaPredicted RBP12.04□□□□□ -0.48
PAX6-244ENST00000638913 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 TAF7LQ5H9L4 462 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 CCDC73Q6ZRK6 1079 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 FILIP1Q7Z7B0 1213 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 XAGE2Q96GT9 111 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
PAX6-244ENST00000638913 PUS7LQ9H0K6 701 aaKnown RBP12.04□□□□□ -0.48
PAX6-244ENST00000638913 PRDM11Q9NQV5 511 aa12.04□□□□□ -0.48
PAX6-244ENST00000638913 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
PAX6-244ENST00000638913 CAMTA1Q9Y6Y1 1673 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 DCCP43146 1447 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 PALLDQ8WX93 1383 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 BECN2A8MW95 431 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 KINO60870 393 aaKnown RBP12.03□□□□□ -0.48
PAX6-244ENST00000638913 ZAP70P43403 619 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 IQCB1Q15051 598 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 NAA16Q6N069 864 aaPredicted RBP12.03□□□□□ -0.48
PAX6-244ENST00000638913 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 FOXP2O15409 715 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 FGAP02671 866 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 RXRAP19793 462 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 GPTP24298 496 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 CBX1P83916 185 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 NAA30Q147X3 362 aaPredicted RBP12.03□□□□□ -0.48
PAX6-244ENST00000638913 ISM2Q6H9L7 571 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 PCDHA7Q9UN72 937 aa12.03□□□□□ -0.48
PAX6-244ENST00000638913 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.48
PAX6-244ENST00000638913 KLF18A0A0U1RQI7 1052 aa12.02□□□□□ -0.49
PAX6-244ENST00000638913 BIN1O00499 593 aa12.02□□□□□ -0.49
PAX6-244ENST00000638913 TPD52L1Q16890 204 aaPredicted RBP12.02□□□□□ -0.49
PAX6-244ENST00000638913 CCDC158Q5M9N0 1113 aa12.02□□□□□ -0.49
PAX6-244ENST00000638913 PPP4R3BQ5MIZ7 849 aa12.02□□□□□ -0.49
PAX6-244ENST00000638913 CCDC191Q8NCU4 936 aa12.02□□□□□ -0.49
PAX6-244ENST00000638913 SDF4Q9BRK5 362 aa12.02□□□□□ -0.49
PAX6-244ENST00000638913 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
PAX6-244ENST00000638913 USP27XA6NNY8 438 aa12.01□□□□□ -0.49
PAX6-244ENST00000638913 GOLGA8BA8MQT2 603 aa12.01□□□□□ -0.49
PAX6-244ENST00000638913 PRC1O43663 620 aa12.01□□□□□ -0.49
PAX6-244ENST00000638913 SF3A1Q15459 793 aaKnown RBP12.01□□□□□ -0.49
PAX6-244ENST00000638913 STX1AQ16623 288 aa12.01□□□□□ -0.49
PAX6-244ENST00000638913 AOPEPQ8N6M6 819 aa12.01□□□□□ -0.49
PAX6-244ENST00000638913 ZNF396Q96N95 335 aaPredicted RBP12.01□□□□□ -0.49
PAX6-244ENST00000638913 RFX7Q2KHR2 1363 aa12.01□□□□□ -0.49
PAX6-244ENST00000638913 TNNT1P13805 278 aa12.01□□□□□ -0.49
PAX6-244ENST00000638913 GTF2F1P35269 517 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms