RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 WISP1O95388 367 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 IGLV1-40P01703 118 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 EPHA1P21709 976 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 ADAMTSL4Q6UY14 1074 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 ATCAYQ86WG3 371 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 PMEPA1Q969W9 287 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 PCMTD2Q9NV79 361 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 KCNK4Q9NYG8 393 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 STOML1Q9UBI4 398 aa7.54□□□□□ -1.2
CCDC7-211ENST00000638889 H3BRJ5 948 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 CABP4P57796 275 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 PIP4K2BP78356 416 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 NOM1Q5C9Z4 860 aaKnown RBP7.53□□□□□ -1.2
CCDC7-211ENST00000638889 KIAA1211Q6ZU35 1233 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 ARMC10Q8N2F6 343 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 TTC16Q8NEE8 873 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 FAM46AQ96IP4 442 aaKnown RBP7.53□□□□□ -1.2
CCDC7-211ENST00000638889 CARD10Q9BWT7 1032 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 OSGEPQ9NPF4 335 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 CNTN3Q9P232 1028 aa7.53□□□□□ -1.2
CCDC7-211ENST00000638889 CES1P23141 567 aa7.52□□□□□ -1.21
CCDC7-211ENST00000638889 MZF1P28698 734 aaPredicted RBP7.52□□□□□ -1.21
CCDC7-211ENST00000638889 CDC25BP30305 580 aa7.52□□□□□ -1.21
CCDC7-211ENST00000638889 CD97P48960 835 aa7.52□□□□□ -1.21
CCDC7-211ENST00000638889 EDEM1Q92611 657 aa7.52□□□□□ -1.21
CCDC7-211ENST00000638889 SH2B1Q9NRF2 756 aaPredicted RBP7.52□□□□□ -1.21
CCDC7-211ENST00000638889 KANSL3Q9P2N6 904 aa7.52□□□□□ -1.21
CCDC7-211ENST00000638889 KRTAP9-6A0A140TA67 174 aa7.51□□□□□ -1.21
CCDC7-211ENST00000638889 NFKBIEO00221 500 aa7.51□□□□□ -1.21
CCDC7-211ENST00000638889 PDGFAP04085 211 aa7.51□□□□□ -1.21
CCDC7-211ENST00000638889 ALKBH2Q6NS38 261 aa7.51□□□□□ -1.21
CCDC7-211ENST00000638889 C1orf127Q8N9H9 656 aa7.51□□□□□ -1.21
CCDC7-211ENST00000638889 FOXD4L4Q8WXT5 416 aaPredicted RBP7.51□□□□□ -1.21
CCDC7-211ENST00000638889 UTP4Q969X6 686 aaKnown RBP7.51□□□□□ -1.21
CCDC7-211ENST00000638889 KLHDC7BQ96G42 594 aa7.51□□□□□ -1.21
CCDC7-211ENST00000638889 MYRFLQ96LU7 910 aa7.51□□□□□ -1.21
CCDC7-211ENST00000638889 DZANK1Q9NVP4 752 aa7.51□□□□□ -1.21
CCDC7-211ENST00000638889 ADAM11O75078 769 aa7.5□□□□□ -1.21
CCDC7-211ENST00000638889 DNM1Q05193 864 aaKnown RBP7.5□□□□□ -1.21
CCDC7-211ENST00000638889 GGNBP2Q9H3C7 697 aa7.5□□□□□ -1.21
CCDC7-211ENST00000638889 PDE2AO00408 941 aaPredicted RBP7.49□□□□□ -1.21
CCDC7-211ENST00000638889 DDX3YO15523 660 aaKnown RBP7.49□□□□□ -1.21
CCDC7-211ENST00000638889 COBLO75128 1261 aa7.49□□□□□ -1.21
CCDC7-211ENST00000638889 SSTR4P31391 388 aa7.49□□□□□ -1.21
CCDC7-211ENST00000638889 EIF1AXP47813 144 aaKnown RBP7.49□□□□□ -1.21
CCDC7-211ENST00000638889 NFIAQ12857 509 aa7.49□□□□□ -1.21
CCDC7-211ENST00000638889 C8orf34Q49A92 452 aa7.49□□□□□ -1.21
CCDC7-211ENST00000638889 ANKRD34AQ69YU3 496 aa7.49□□□□□ -1.21
CCDC7-211ENST00000638889 UBASH3BQ8TF42 649 aa7.49□□□□□ -1.21
CCDC7-211ENST00000638889 KIAA1324LA8MWY0 1029 aaPredicted RBP7.48□□□□□ -1.21
CCDC7-211ENST00000638889 SSFA2P28290 1259 aa7.48□□□□□ -1.21
CCDC7-211ENST00000638889 ARL4DP49703 201 aa7.48□□□□□ -1.21
CCDC7-211ENST00000638889 RNF43Q68DV7 783 aa7.48□□□□□ -1.21
CCDC7-211ENST00000638889 INTS5Q6P9B9 1019 aaKnown RBP7.48□□□□□ -1.21
CCDC7-211ENST00000638889 ZDHHC13Q8IUH4 622 aa7.48□□□□□ -1.21
CCDC7-211ENST00000638889 CLEC10AQ8IUN9 316 aa7.48□□□□□ -1.21
CCDC7-211ENST00000638889 TMEM102Q8N9M5 508 aaPredicted RBP7.48□□□□□ -1.21
CCDC7-211ENST00000638889 GTF3C2Q8WUA4 911 aaPredicted RBP7.48□□□□□ -1.21
CCDC7-211ENST00000638889 RNF208Q9H0X6 261 aa7.48□□□□□ -1.21
CCDC7-211ENST00000638889 C7orf69Q9H7B7 122 aa7.48□□□□□ -1.21
CCDC7-211ENST00000638889 SOX13Q9UN79 622 aa7.48□□□□□ -1.21
CCDC7-211ENST00000638889 PPP1R15AO75807 674 aaPredicted RBP7.47□□□□□ -1.21
CCDC7-211ENST00000638889 NPR3P17342 541 aa7.47□□□□□ -1.21
CCDC7-211ENST00000638889 MPSTP25325 297 aa7.47□□□□□ -1.21
CCDC7-211ENST00000638889 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.47□□□□□ -1.21
CCDC7-211ENST00000638889 TRIM42Q8IWZ5 723 aa7.47□□□□□ -1.21
CCDC7-211ENST00000638889 FAM20CQ8IXL6 584 aa7.47□□□□□ -1.21
CCDC7-211ENST00000638889 DBNDD2Q9BQY9 259 aa7.47□□□□□ -1.21
CCDC7-211ENST00000638889 CHRDQ9H2X0 955 aa7.47□□□□□ -1.21
CCDC7-211ENST00000638889 HIF3AQ9Y2N7 669 aa7.47□□□□□ -1.21
CCDC7-211ENST00000638889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.47□□□□□ -1.21
CCDC7-211ENST00000638889 MEGF11A6BM72 1044 aa7.46□□□□□ -1.22
CCDC7-211ENST00000638889 SART1O43290 800 aaKnown RBP7.46□□□□□ -1.22
CCDC7-211ENST00000638889 TGFB1P01137 390 aa7.46□□□□□ -1.22
CCDC7-211ENST00000638889 GRIK1P39086 918 aa7.46□□□□□ -1.22
CCDC7-211ENST00000638889 USP5P45974 858 aa7.46□□□□□ -1.22
CCDC7-211ENST00000638889 EHHADHQ08426 723 aa7.46□□□□□ -1.22
CCDC7-211ENST00000638889 NXPE3Q969Y0 559 aa7.46□□□□□ -1.22
CCDC7-211ENST00000638889 FAM83CQ9BQN1 747 aa7.46□□□□□ -1.22
CCDC7-211ENST00000638889 RUSC1Q9BVN2 902 aa7.46□□□□□ -1.22
CCDC7-211ENST00000638889 COL17A1Q9UMD9 1497 aaPredicted RBP7.45□□□□□ -1.22
CCDC7-211ENST00000638889 HMX2A2RU54 273 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 EDN3P14138 238 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 ACPPP15309 386 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 C19orf57Q0VDD7 668 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 MCTP1Q6DN14 999 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 BSNDQ8WZ55 320 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 POLIQ9UNA4 740 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 MTMR7Q9Y216 660 aa7.45□□□□□ -1.22
CCDC7-211ENST00000638889 A6NHS1 94 aa7.44□□□□□ -1.22
CCDC7-211ENST00000638889 FAM13AO94988 1023 aa7.44□□□□□ -1.22
CCDC7-211ENST00000638889 MED26O95402 600 aa7.44□□□□□ -1.22
CCDC7-211ENST00000638889 BMP3P12645 472 aa7.44□□□□□ -1.22
CCDC7-211ENST00000638889 FDX2Q6P4F2 183 aa7.44□□□□□ -1.22
CCDC7-211ENST00000638889 SNX29Q8TEQ0 813 aa7.44□□□□□ -1.22
CCDC7-211ENST00000638889 SLC7A3Q8WY07 619 aa7.44□□□□□ -1.22
CCDC7-211ENST00000638889 HHIPQ96QV1 700 aa7.44□□□□□ -1.22
CCDC7-211ENST00000638889 OSMRQ99650 979 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms