RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 CICQ96RK0 1608 aaPredicted RBP22.31■■□□□ 1.16
CLN5-219ENST00000637537 PHKA1P46020 1223 aa22.31■■□□□ 1.16
CLN5-219ENST00000637537 RPS6KB1P23443 525 aa22.3■■□□□ 1.16
CLN5-219ENST00000637537 ST3GAL1Q11201 340 aa22.3■■□□□ 1.16
CLN5-219ENST00000637537 WASHC4Q2M389 1173 aa22.3■■□□□ 1.16
CLN5-219ENST00000637537 ZNF652Q9Y2D9 606 aa22.3■■□□□ 1.16
CLN5-219ENST00000637537 U3KPZ7 1027 aaPredicted RBP22.3■■□□□ 1.16
CLN5-219ENST00000637537 DDX60Q8IY21 1712 aaKnown RBP22.3■■□□□ 1.16
CLN5-219ENST00000637537 HSPD1P10809 573 aaKnown RBP22.3■■□□□ 1.16
CLN5-219ENST00000637537 AMIGO3Q86WK7 504 aa22.3■■□□□ 1.16
CLN5-219ENST00000637537 AK7Q96M32 723 aa22.3■■□□□ 1.16
CLN5-219ENST00000637537 AFF2P51816 1311 aa22.3■■□□□ 1.16
CLN5-219ENST00000637537 BTAF1O14981 1849 aa22.3■■□□□ 1.16
CLN5-219ENST00000637537 ERFEQ4G0M1 354 aa22.29■■□□□ 1.16
CLN5-219ENST00000637537 C3orf67Q6ZVT6 689 aa22.29■■□□□ 1.16
CLN5-219ENST00000637537 SRP68Q9UHB9 627 aaKnown RBP22.29■■□□□ 1.16
CLN5-219ENST00000637537 PTMSP20962 102 aa22.29■■□□□ 1.16
CLN5-219ENST00000637537 TSGA10IPQ3SY00 556 aa22.29■■□□□ 1.16
CLN5-219ENST00000637537 CCDC152Q4G0S7 254 aa22.29■■□□□ 1.16
CLN5-219ENST00000637537 CCDC102BQ68D86 513 aa22.29■■□□□ 1.16
CLN5-219ENST00000637537 PPP1R9BQ96SB3 815 aa22.29■■□□□ 1.16
CLN5-219ENST00000637537 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
CLN5-219ENST00000637537 GNPATO15228 680 aa22.28■■□□□ 1.16
CLN5-219ENST00000637537 TOB2Q14106 344 aaPredicted RBP22.28■■□□□ 1.16
CLN5-219ENST00000637537 PUM3Q15397 648 aaKnown RBP22.28■■□□□ 1.16
CLN5-219ENST00000637537 TBC1D9BQ66K14 1250 aa22.28■■□□□ 1.16
CLN5-219ENST00000637537 STOX1Q6ZVD7 989 aa22.28■■□□□ 1.16
CLN5-219ENST00000637537 NEK1Q96PY6 1258 aa22.28■■□□□ 1.16
CLN5-219ENST00000637537 PUS7LQ9H0K6 701 aaKnown RBP22.28■■□□□ 1.16
CLN5-219ENST00000637537 AKAP11Q9UKA4 1901 aa22.28■■□□□ 1.16
CLN5-219ENST00000637537 COL4A1P02462 1669 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 MROH5Q6ZUA9 1318 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 PRPF40AO75400 957 aaKnown RBP22.27■■□□□ 1.16
CLN5-219ENST00000637537 TTLL5Q6EMB2 1281 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 LRRC2Q9BYS8 371 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 BCL2L12Q9HB09 334 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 THSD7AQ9UPZ6 1657 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 CCDC173Q0VFZ6 552 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 CLEC4GQ6UXB4 293 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 LMBRD1Q9NUN5 540 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 SMC3Q9UQE7 1217 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.27■■□□□ 1.16
CLN5-219ENST00000637537 DDX49Q9Y6V7 483 aaKnown RBP22.27■■□□□ 1.16
CLN5-219ENST00000637537 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
CLN5-219ENST00000637537 CNTNAP4Q9C0A0 1308 aa22.26■■□□□ 1.15
CLN5-219ENST00000637537 FGFR2P21802 821 aa22.26■■□□□ 1.15
CLN5-219ENST00000637537 STK3Q13188 491 aa22.26■■□□□ 1.15
CLN5-219ENST00000637537 CCDC24Q8N4L8 307 aa22.26■■□□□ 1.15
CLN5-219ENST00000637537 LPIN2Q92539 896 aa22.26■■□□□ 1.15
CLN5-219ENST00000637537 DSCC1Q9BVC3 393 aa22.26■■□□□ 1.15
CLN5-219ENST00000637537 MYO5AQ9Y4I1 1855 aaKnown RBP22.25■■□□□ 1.15
CLN5-219ENST00000637537 ZSCAN31Q96LW9 406 aaPredicted RBP22.25■■□□□ 1.15
CLN5-219ENST00000637537 BCORQ6W2J9 1755 aa22.25■■□□□ 1.15
CLN5-219ENST00000637537 TAF1P21675 1872 aa22.25■■□□□ 1.15
CLN5-219ENST00000637537 GJB2P29033 226 aa22.25■■□□□ 1.15
CLN5-219ENST00000637537 KRT32Q14532 448 aa22.25■■□□□ 1.15
CLN5-219ENST00000637537 PIH1D3Q9NQM4 214 aaKnown RBP22.25■■□□□ 1.15
CLN5-219ENST00000637537 SH2B1Q9NRF2 756 aaPredicted RBP22.25■■□□□ 1.15
CLN5-219ENST00000637537 LRP5O75197 1615 aa22.25■■□□□ 1.15
CLN5-219ENST00000637537 FOXP2O15409 715 aa22.24■■□□□ 1.15
CLN5-219ENST00000637537 IDH1O75874 414 aaKnown RBP22.24■■□□□ 1.15
CLN5-219ENST00000637537 SYT1P21579 422 aa22.24■■□□□ 1.15
CLN5-219ENST00000637537 IGHMBP2P38935 993 aaKnown RBP22.24■■□□□ 1.15
CLN5-219ENST00000637537 WTIPA6NIX2 430 aaPredicted RBP22.24■■□□□ 1.15
CLN5-219ENST00000637537 OFD1O75665 1012 aa22.24■■□□□ 1.15
CLN5-219ENST00000637537 TERF1P54274 439 aa22.24■■□□□ 1.15
CLN5-219ENST00000637537 NCLP19338 710 aaKnown RBP22.23■■□□□ 1.15
CLN5-219ENST00000637537 GTF2E1P29083 439 aaPredicted RBP22.23■■□□□ 1.15
CLN5-219ENST00000637537 SLC9C2Q5TAH2 1124 aa22.23■■□□□ 1.15
CLN5-219ENST00000637537 ZSCAN30Q86W11 494 aa22.23■■□□□ 1.15
CLN5-219ENST00000637537 SEPT12Q8IYM1 358 aa22.23■■□□□ 1.15
CLN5-219ENST00000637537 ABCC12Q96J65 1359 aa22.23■■□□□ 1.15
CLN5-219ENST00000637537 ZNF831Q5JPB2 1677 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 RPS6KA4O75676 772 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 PHF14O94880 888 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 Q6ZUG5 572 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 ZFYP08048 801 aaPredicted RBP22.22■■□□□ 1.15
CLN5-219ENST00000637537 SLC5A1P13866 664 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 ARID4AP29374 1257 aaPredicted RBP22.22■■□□□ 1.15
CLN5-219ENST00000637537 HAND2P61296 217 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 CHRNDQ07001 517 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 APPBP2Q92624 585 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 GDPD2Q9HCC8 539 aa22.22■■□□□ 1.15
CLN5-219ENST00000637537 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
CLN5-219ENST00000637537 STX6O43752 255 aa22.21■■□□□ 1.15
CLN5-219ENST00000637537 BCAMP50895 628 aa22.21■■□□□ 1.15
CLN5-219ENST00000637537 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
CLN5-219ENST00000637537 NARFQ9UHQ1 456 aa22.21■■□□□ 1.15
CLN5-219ENST00000637537 NHSQ6T4R5 1651 aa22.21■■□□□ 1.15
CLN5-219ENST00000637537 RASGRF1Q13972 1273 aa22.21■■□□□ 1.15
CLN5-219ENST00000637537 ANKRD1Q15327 319 aa22.21■■□□□ 1.15
CLN5-219ENST00000637537 CHST3Q7LGC8 479 aa22.21■■□□□ 1.15
CLN5-219ENST00000637537 ZNF512BQ96KM6 892 aaPredicted RBP22.21■■□□□ 1.15
CLN5-219ENST00000637537 ZPR1O75312 459 aa22.2■■□□□ 1.14
CLN5-219ENST00000637537 KLHL40Q2TBA0 621 aa22.2■■□□□ 1.14
CLN5-219ENST00000637537 TICAM2Q86XR7 235 aa22.2■■□□□ 1.14
CLN5-219ENST00000637537 RTCBQ9Y3I0 505 aaKnown RBP22.2■■□□□ 1.14
CLN5-219ENST00000637537 E7EWF7 191 aa22.2■■□□□ 1.14
CLN5-219ENST00000637537 GPAA1O43292 621 aa22.2■■□□□ 1.14
CLN5-219ENST00000637537 RC3H1Q5TC82 1133 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms