RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 ACTN4O43707 911 aaKnown RBP6.9□□□□□ -1.3
SCN2A-213ENST00000636769 TMTC1Q8IUR5 882 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 DDX23Q9BUQ8 820 aaKnown RBP6.9□□□□□ -1.3
SCN2A-213ENST00000636769 BCAP29Q9UHQ4 241 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 HIP1RO75146 1068 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 ARID4AP29374 1257 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-213ENST00000636769 TNIP1Q15025 636 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 NCOA7Q8NI08 942 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 NAPBQ9H115 298 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 VCX3AQ9NNX9 186 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 PLCB1Q9NQ66 1216 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 JRKLQ9Y4A0 524 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 HMGB1P1B2RPK0 211 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-213ENST00000636769 ZKSCAN8Q15776 578 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-213ENST00000636769 C9orf84Q5VXU9 1444 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 PNMA8AQ86V59 439 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-213ENST00000636769 TMTC2Q8N394 836 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 RAB3IPQ96QF0 476 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-213ENST00000636769 SEC62Q99442 399 aaKnown RBP6.9□□□□□ -1.3
SCN2A-213ENST00000636769 PPP1R12CQ9BZL4 782 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 UNC13AQ9UPW8 1703 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 NLRP6P59044 892 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 PSME1Q06323 249 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 GRIPAP1Q4V328 841 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 HSP90AA5PQ58FG0 334 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 CCDC122Q5T0U0 273 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 MTUS1Q9ULD2 1270 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 CAPN7Q9Y6W3 813 aa6.9□□□□□ -1.3
SCN2A-213ENST00000636769 PDE1AP54750 535 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 USP37Q86T82 979 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 ANKRD44Q8N8A2 993 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 EXOC4Q96A65 974 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 MTMR7Q9Y216 660 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 FAN1Q9Y2M0 1017 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 MACROD2A1Z1Q3 448 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 SNCBQ16143 134 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 CYP26C1Q6V0L0 522 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 CCDC51Q96ER9 411 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 RRP15Q9Y3B9 282 aaKnown RBP6.9□□□□□ -1.31
SCN2A-213ENST00000636769 DNMBPQ6XZF7 1577 aa6.9□□□□□ -1.31
SCN2A-213ENST00000636769 GUCY1B3Q02153 619 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 ERCC6LQ2NKX8 1250 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 ARMC9Q7Z3E5 817 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 LRRD1A4D1F6 860 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 METAP2P50579 478 aaKnown RBP eCLIP6.89□□□□□ -1.31
SCN2A-213ENST00000636769 MAP3K21Q5TCX8 1036 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 CATIPQ7Z7H3 387 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 VIMP08670 466 aaKnown RBP6.89□□□□□ -1.31
SCN2A-213ENST00000636769 SMARCC2Q8TAQ2 1214 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 RAB3IL1Q8TBN0 382 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 THEGQ9P2T0 379 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 PCDHB15Q9Y5E8 787 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 NDC80O14777 642 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 IFIT1P09914 478 aaKnown RBP6.89□□□□□ -1.31
SCN2A-213ENST00000636769 IDEP14735 1019 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 IFT81Q8WYA0 676 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 SPG7Q9UQ90 795 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 EVA1CP58658 441 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 KARSQ15046 597 aaKnown RBP6.89□□□□□ -1.31
SCN2A-213ENST00000636769 TTF1Q15361 905 aaPredicted RBP6.89□□□□□ -1.31
SCN2A-213ENST00000636769 DBN1Q16643 649 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 ICE2Q659A1 982 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 VSIG1Q86XK7 387 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 RPUSD2Q8IZ73 545 aaKnown RBP6.89□□□□□ -1.31
SCN2A-213ENST00000636769 ZNF76P36508 570 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 NLRP5P59047 1200 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 MCUR1Q96AQ8 359 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 TRIM4Q9C037 500 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 BOLA2Q9H3K6 86 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 VWA3BQ502W6 1294 aa6.89□□□□□ -1.31
SCN2A-213ENST00000636769 TTC41PQ6P2S7 1318 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 EPRSP07814 1512 aaKnown RBP6.88□□□□□ -1.31
SCN2A-213ENST00000636769 IFIT3O14879 490 aaKnown RBP6.88□□□□□ -1.31
SCN2A-213ENST00000636769 MAP3K12Q12852 859 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 TRPC3Q13507 836 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 AMOTQ4VCS5 1084 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 MCTP2Q6DN12 878 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 FCHSD1Q86WN1 690 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 BAIAP2L1Q9UHR4 511 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 RNF123Q5XPI4 1314 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 POLR3DP05423 398 aaPredicted RBP6.88□□□□□ -1.31
SCN2A-213ENST00000636769 MAP7D1Q3KQU3 841 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 BRF1Q92994 677 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 PSDA5PKW4 1024 aaPredicted RBP6.88□□□□□ -1.31
SCN2A-213ENST00000636769 PRC1O43663 620 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 RFC1P35251 1148 aaPredicted RBP6.88□□□□□ -1.31
SCN2A-213ENST00000636769 CCT2P78371 535 aaKnown RBP6.88□□□□□ -1.31
SCN2A-213ENST00000636769 RABGGTAQ92696 567 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 MRFAP1L1Q96HT8 127 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 CAPZA3Q96KX2 299 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 NUP58Q9BVL2 599 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 LMBRD1Q9NUN5 540 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 GKAP1Q5VSY0 366 aaPredicted RBP6.88□□□□□ -1.31
SCN2A-213ENST00000636769 CCDC62Q6P9F0 684 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 USP26Q9BXU7 913 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 FAM114A2Q9NRY5 505 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 RNF40O75150 1001 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 IDH1O75874 414 aaKnown RBP6.88□□□□□ -1.31
SCN2A-213ENST00000636769 CETN3O15182 167 aa6.88□□□□□ -1.31
SCN2A-213ENST00000636769 PPP2R5EQ16537 467 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms