RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 TMOD3Q9NYL9 352 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 PCDHGC3Q9UN70 934 aa5.07□□□□□ -1.6
CLN5-214ENST00000636705 RCCD1A6NED2 376 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 GUCA2AQ02747 115 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 PPP1R18Q6NYC8 613 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 SPNS2Q8IVW8 549 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 STAG1Q8WVM7 1258 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 MKRN1Q9UHC7 482 aaKnown RBP5.06□□□□□ -1.6
CLN5-214ENST00000636705 BCS1LQ9Y276 419 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 NOP58Q9Y2X3 529 aaKnown RBP5.06□□□□□ -1.6
CLN5-214ENST00000636705 SHANK3Q9BYB0 1731 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 LOC102724428A0A0B4J2F2 783 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 C3orf80F5H4A9 247 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 RFC4P35249 363 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 SLC4A3P48751 1232 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 SIK1P57059 783 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 BMS1Q14692 1282 aaKnown RBP5.06□□□□□ -1.6
CLN5-214ENST00000636705 NR6A1Q15406 480 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 DALRD3Q5D0E6 543 aaKnown RBP5.06□□□□□ -1.6
CLN5-214ENST00000636705 PRPF38BQ5VTL8 546 aaKnown RBP5.06□□□□□ -1.6
CLN5-214ENST00000636705 IFNL2Q8IZJ0 200 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 TMEM87AQ8NBN3 555 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 ANKK1Q8NFD2 765 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 MORC4Q8TE76 937 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 ZFRQ96KR1 1074 aaKnown RBP5.06□□□□□ -1.6
CLN5-214ENST00000636705 SEPT9Q9UHD8 586 aaPredicted RBP5.06□□□□□ -1.6
CLN5-214ENST00000636705 G3BP2Q9UN86 482 aaKnown RBP5.06□□□□□ -1.6
CLN5-214ENST00000636705 INSRP06213 1382 aa5.06□□□□□ -1.6
CLN5-214ENST00000636705 PIK3C2AO00443 1686 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 U2SURPO15042 1029 aaKnown RBP5.05□□□□□ -1.6
CLN5-214ENST00000636705 PRMT3O60678 531 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 ICMTO60725 284 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 VEGFAP15692 232 aaPredicted RBP5.05□□□□□ -1.6
CLN5-214ENST00000636705 GJA5P36382 358 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 ATP6V1AP38606 617 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 CCDC181Q5TID7 509 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 ZNF746Q6NUN9 644 aaPredicted RBP5.05□□□□□ -1.6
CLN5-214ENST00000636705 GLYCTKQ8IVS8 523 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 FAM200AQ8TCP9 573 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 SLC12A5Q9H2X9 1139 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 ZBTB3Q9H5J0 574 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 TMEM134Q9H6X4 195 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 DCTN4Q9UJW0 460 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 EP400Q96L91 3159 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 COL24A1Q17RW2 1714 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 WNK3Q9BYP7 1800 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 WASHC2AQ641Q2 1341 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 DDX11L8A8MPP1 907 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 ERVV-2B6SEH9 535 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 SMAPO00193 183 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 MMP10P09238 476 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 SKIP12755 728 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 RASA1P20936 1047 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 WWC3Q9ULE0 1092 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 COL4A3BPQ9Y5P4 624 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 FAM208AQ9UK61 1670 aaKnown RBP5.05□□□□□ -1.6
CLN5-214ENST00000636705 FLT4P35916 1363 aa5.05□□□□□ -1.6
CLN5-214ENST00000636705 CFAP99D6REC4 459 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 PPFIA4O75335 1185 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 RPS6KA4O75676 772 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 ANAPC15P60006 121 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 KCNH2Q12809 1159 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 AMOTQ4VCS5 1084 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 HSP90AB4PQ58FF6 505 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 SPTY2D1Q68D10 685 aaPredicted RBP5.04□□□□□ -1.6
CLN5-214ENST00000636705 CAPN12Q6ZSI9 719 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 SLF2Q8IX21 1173 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 SLC43A3Q8NBI5 491 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 AIDAQ96BJ3 306 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 LGR5O75473 907 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 MCCD1P59942 119 aaPredicted RBP5.04□□□□□ -1.6
CLN5-214ENST00000636705 RBL2Q08999 1139 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 DPYDQ12882 1025 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 NCOA4Q13772 614 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 PLEKHG6Q3KR16 790 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 NBPF6Q5VWK0 638 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 WNT2BQ93097 391 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 LRCH3Q96II8 777 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 NBPF4Q96M43 638 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 TGIF2Q9GZN2 237 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 IRF2BPLQ9H1B7 796 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 SEPT3Q9UH03 358 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 BTAF1O14981 1849 aa5.04□□□□□ -1.6
CLN5-214ENST00000636705 USP54Q70EL1 1684 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 CNTNAP4Q9C0A0 1308 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 SOWAHBA6NEL2 793 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 LZTS3O60299 673 aaPredicted RBP5.03□□□□□ -1.6
CLN5-214ENST00000636705 KCNQ4P56696 695 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 OCLNQ16625 522 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 PLEKHO1Q53GL0 409 aaPredicted RBP5.03□□□□□ -1.6
CLN5-214ENST00000636705 SOGA3Q5TF21 947 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 PIGBQ92521 554 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 ZNF594Q96JF6 807 aaPredicted RBP5.03□□□□□ -1.6
CLN5-214ENST00000636705 DCAF5Q96JK2 942 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 GMLQ99445 158 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 SPOCK3Q9BQ16 436 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 CCSER2Q9H7U1 834 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 PCDH12Q9NPG4 1184 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 IFT57Q9NWB7 429 aa5.03□□□□□ -1.6
CLN5-214ENST00000636705 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms